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Samantha Riesenfeld
Samantha Riesenfeld
Postdoctoral Fellow, Broad Institute of Harvard and MIT
Verified email at broadinstitute.org - Homepage
Title
Cited by
Cited by
Year
Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis
JA Farrell, Y Wang, SJ Riesenfeld, K Shekhar, A Regev, AF Schier
Science 360 (6392), eaar3131, 2018
7122018
EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data
ATL Lun, S Riesenfeld, T Andrews, TP Dao, T Gomes, ...
Genome biology 20, 1-9, 2019
6602019
The neuropeptide NMU amplifies ILC2-driven allergic lung inflammation
A Wallrapp, SJ Riesenfeld, PR Burkett, REE Abdulnour, J Nyman, ...
Nature 549 (7672), 351-356, 2017
5442017
Power-aware base station positioning for sensor networks
A Bogdanov, E Maneva, S Riesenfeld
IEEE INFOCOM 2004 1, 2004
2222004
A cellular and spatial map of the choroid plexus across brain ventricles and ages
N Dani, RH Herbst, C McCabe, GS Green, K Kaiser, JP Head, J Cui, ...
Cell 184 (11), 3056-3074. e21, 2021
2152021
participants in the 1st Human Cell Atlas Jamboree, et al. EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data
ATL Lun, S Riesenfeld, T Andrews, TP Dao, T Gomes, JC Marioni
Genome Biol 20 (1), 63, 2019
2092019
Transcriptional atlas of intestinal immune cells reveals that neuropeptide α-CGRP modulates group 2 innate lymphoid cell responses
H Xu, J Ding, CBM Porter, A Wallrapp, M Tabaka, S Ma, S Fu, X Guo, ...
Immunity 51 (4), 696-708. e9, 2019
1822019
Calcitonin gene-related peptide negatively regulates alarmin-driven type 2 innate lymphoid cell responses
A Wallrapp, PR Burkett, SJ Riesenfeld, SJ Kim, E Christian, ...
Immunity 51 (4), 709-723. e6, 2019
1592019
Skin-resident innate lymphoid cells converge on a pathogenic effector state
P Bielecki, SJ Riesenfeld, JC Hütter, E Torlai Triglia, MS Kowalczyk, ...
Nature 592 (7852), 128-132, 2021
1402021
PhylOTU: a high-throughput procedure quantifies microbial community diversity and resolves novel taxa from metagenomic data
TJ Sharpton, SJ Riesenfeld, SW Kembel, J Ladau, JP O'Dwyer, JL Green, ...
PLoS computational biology 7 (1), e1001061, 2011
1162011
Sorting and selection in posets
C Daskalakis, RM Karp, E Mossel, SJ Riesenfeld, E Verbin
SIAM Journal on Computing 40 (3), 597-622, 2011
1032011
participants in the 1st Human Cell Atlas Jamboree, and Marioni, JC (2019). EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data
ATL Lun, S Riesenfeld, T Andrews, TP Dao, T Gomes
Genome Biol 20 (63), 10.1186, 0
82
Nociceptor neurons direct goblet cells via a CGRP-RAMP1 axis to drive mucus production and gut barrier protection
D Yang, A Jacobson, KA Meerschaert, JJ Sifakis, M Wu, X Chen, T Yang, ...
Cell 185 (22), 4190-4205. e25, 2022
682022
A distinct transcriptional program in human CAR T cells bearing the 4-1BB signaling domain revealed by scRNA-seq
AC Boroughs, RC Larson, ND Marjanovic, K Gosik, AP Castano, ...
Molecular Therapy 28 (12), 2577-2592, 2020
672020
Type 2 innate lymphoid cells in the induction and resolution of tissue inflammation
A Wallrapp, SJ Riesenfeld, PR Burkett, VK Kuchroo
Immunological reviews 286 (1), 53-73, 2018
462018
What would Edmonds do? Augmenting paths and witnesses for degree-bounded MSTs
K Chaudhuri, S Rao, S Riesenfeld, K Talwar
Algorithmica 55 (1), 157-189, 2009
322009
A compact, in vivo screen of all 6-mers reveals drivers of tissue-specific expression and guides synthetic regulatory element design
RP Smith, SJ Riesenfeld, AK Holloway, Q Li, KK Murphy, NM Feliciano, ...
Genome biology 14, 1-15, 2013
312013
What would Edmonds do? Augmenting paths and witnesses for degree-bounded MSTs
K Chaudhuri, S Rao, S Riesenfeld, K Talwar
International Workshop on Approximation Algorithms for Combinatorial …, 2005
302005
Skin inflammation driven by differentiation of quiescent tissue-resident ILCs into a spectrum of pathogenic effectors
P Bielecki, SJ Riesenfeld, MS Kowalczyk, MC Amezcua Vesely, ...
BioRxiv, 461228, 2018
252018
A push-relabel algorithm for approximating degree bounded MSTs
K Chaudhuri, S Rao, S Riesenfeld, K Talwar
International Colloquium on Automata, Languages, and Programming, 191-201, 2006
242006
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