Jake Lin
Jake Lin
Institute for Molecular Medicine Finland
Verified email at
Cited by
Cited by
Comprehensive molecular portraits of human breast tumours
Brigham & Women’s Hospital & Harvard Medical School Chin Lynda 9 11 Park ...
Nature 490 (7418), 61-70, 2012
Comprehensive molecular characterization of human colon and rectal cancer
Cancer Genome Atlas Network
Nature 487 (7407), 330, 2012
Systems genomics evaluation of the SH-SY5Y neuroblastoma cell line as a model for Parkinson’s disease
A Krishna, M Biryukov, C Trefois, P Antony, R Hussong, J Lin, ...
BMC genomics 15 (1), 1-21, 2014
Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage
EEL Muller, N Pinel, CC Laczny, MR Hoopmann, S Narayanasamy, ...
Nature communications 5 (1), 1-10, 2014
Metagenomics of the faecal virome indicate a cumulative effect of enterovirus and gluten amount on the risk of coeliac disease autoimmunity in genetically at risk children: the …
K Lindfors, J Lin, HS Lee, H Hyöty, M Nykter, K Kurppa, E Liu, S Koletzko, ...
Gut 69 (8), 1416-1422, 2020
Integrated analysis of transcript-level regulation of metabolism reveals disease-relevant nodes of the human metabolic network
M Galhardo, L Sinkkonen, P Berninger, J Lin, T Sauter, M Heinäniemi
Nucleic acids research 42 (3), 1474-1496, 2014
Nature-derived microbiota exposure as a novel immunomodulatory approach
N Nurminen, J Lin, M Grönroos, R Puhakka, L Kramna, HK Vari, H Viskari, ...
Future microbiology 13 (07), 737-744, 2018
Imbalance of bacteriome profiles within the Finnish Diabetes Prediction and Prevention study: Parallel use of 16S profiling and virome sequencing in stool samples from children …
O Cinek, L Kramna, J Lin, S Oikarinen, K Kolarova, J Ilonen, O Simell, ...
Pediatric diabetes 18 (7), 588-598, 2017
Polygenic hyperlipidemias and coronary artery disease risk
P Ripatti, JT Rämö, NJ Mars, Y Fu, J Lin, S Söderlund, C Benner, ...
Circulation: Genomic and Precision Medicine 13 (4), e002725, 2020
Vipie: web pipeline for parallel characterization of viral populations from multiple NGS samples
J Lin, L Kramna, R Autio, H Hyöty, M Nykter, O Cinek
BMC genomics 18 (1), 1-11, 2017
Hemap: An Interactive Online Resource for Characterizing Molecular Phenotypes across Hematologic MalignanciesOrganizing Molecular Diversity of Hematologic Malignancies
P Pölönen, J Mehtonen, J Lin, T Liuksiala, S Häyrynen, S Teppo, ...
Cancer research 79 (10), 2466-2479, 2019
Quantitative analysis of colony morphology in yeast
P Ruusuvuori, J Lin, AC Scott, Z Tan, S Sorsa, A Kallio, M Nykter, ...
BioTechniques 56 (1), 18-27, 2014
High-throughput tetrad analysis
CL Ludlow, AC Scott, GA Cromie, EW Jeffery, A Sirr, P May, J Lin, ...
Nature methods 10 (7), 671-675, 2013
Data-driven characterization of molecular phenotypes across heterogeneous sample collections
J Mehtonen, P Pölönen, S Häyrynen, O Dufva, J Lin, T Liuksiala, ...
Nucleic acids research 47 (13), e76-e76, 2019
Genetic adaptation of coxsackievirus B1 during persistent infection in pancreatic cells
A Honkimaa, B Kimura, AB Sioofy-Khojine, J Lin, J Laiho, S Oikarinen, ...
Microorganisms 8 (11), 1790, 2020
An expanded analysis framework for multivariate GWAS connects inflammatory biomarkers to functional variants and disease
SE Ruotsalainen, JJ Partanen, A Cichonska, J Lin, C Benner, I Surakka, ...
European Journal of Human Genetics 29 (2), 309-324, 2021
MetaPhat: detecting and decomposing multivariate associations from univariate genome-wide association statistics
J Lin, R Tabassum, S Ripatti, M Pirinen
Frontiers in genetics 11, 431, 2020
EPEPT: a web service for enhanced P-value estimation in permutation tests
TA Knijnenburg, J Lin, H Rovira, J Boyle, I Shmulevich
BMC bioinformatics 12 (1), 1-9, 2011
Changes in the lung bacteriome in relation to antipseudomonal therapy in children with cystic fibrosis
L Kramná, P Dřevínek, J Lin, M Kulich, O Cinek
Folia microbiologica 63 (2), 237-248, 2018
Fastbreak: a tool for analysis and visualization of structural variations in genomic data
R Bressler, J Lin, A Eakin, T Robinson, R Kreisberg, H Rovira, ...
EURASIP Journal on Bioinformatics and Systems Biology 2012 (1), 1-8, 2012
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Articles 1–20