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Nicolas Clauvelin
Nicolas Clauvelin
Sendyne Corp.
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Cited by
Cited by
Year
A discrete geometric approach for simulating the dynamics of thin viscous threads
B Audoly, N Clauvelin, PT Brun, M Bergou, E Grinspun, M Wardetzky
Journal of Computational Physics 253, 18-49, 2013
782013
Elastic knots
B Audoly, N Clauvelin, S Neukirch
Physical Review Letters 99 (16), 164301, 2007
732007
Mechanical response of plectonemic DNA: An analytical solution
N Clauvelin, B Audoly, S Neukirch
Macromolecules 41 (12), 4479-4483, 2008
582008
Elasticity and electrostatics of plectonemic DNA
N Clauvelin, B Audoly, S Neukirch
Biophysical journal 96 (9), 3716-3723, 2009
542009
Internucleosomal interactions mediated by histone tails allow distant communication in chromatin
OI Kulaeva, G Zheng, YS Polikanov, AV Colasanti, N Clauvelin, ...
Journal of Biological Chemistry 287 (24), 20248-20257, 2012
512012
Characterization of the geometry and topology of DNA pictured as a discrete collection of atoms
N Clauvelin, WK Olson, I Tobias
Journal of chemical theory and computation 8 (3), 1092-1107, 2012
372012
Matched asymptotic expansions for twisted elastic knots: a self-contact problem with non-trivial contact topology
N Clauvelin, B Audoly, S Neukirch
Journal of the Mechanics and Physics of Solids 57 (9), 1623-1656, 2009
372009
Nucleosome-free DNA regions differentially affect distant communication in chromatin
EV Nizovtseva, N Clauvelin, S Todolli, YS Polikanov, OI Kulaeva, ...
Nucleic acids research 45 (6), 3059-3067, 2017
352017
Nucleosome positioning and composition modulate in silico chromatin flexibility
N Clauvelin, P Lo, OI Kulaeva, EV Nizovtseva, J Diaz-Montes, J Zola, ...
Journal of Physics: Condensed Matter 27 (6), 064112, 2015
342015
Contributions of sequence to the higher-order structures of DNA
S Todolli, PJ Perez, N Clauvelin, WK Olson
Biophysical journal 112 (3), 416-426, 2017
252017
Insights into gene expression and packaging from computer simulations
WK Olson, N Clauvelin, AV Colasanti, G Singh, G Zheng
Biophysical reviews 4, 171-178, 2012
132012
Weak operator binding enhances simulated lac repressor‐mediated DNA looping
AV Colasanti, MA Grosner, PJ Perez, N Clauvelin, XJ Lu, WK Olson
Biopolymers 99 (12), 1070-1081, 2013
122013
Synergy between protein positioning and DNA elasticity: energy minimization of protein-decorated DNA minicircles
N Clauvelin, WK Olson
The Journal of Physical Chemistry B 125 (9), 2277-2287, 2021
11*2021
What controls DNA looping?
PJ Perez, N Clauvelin, MA Grosner, AV Colasanti, WK Olson
International journal of molecular sciences 15 (9), 15090-15108, 2014
112014
Parallels between DNA and collagen–comparing elastic models of the double and triple helix
F Xu, H Zheng, N Clauvelin, XJ Lu, WK Olson, V Nanda
Scientific reports 7 (1), 12802, 2017
72017
Analytical results for the plectonemic response of supercoiled DNA
N Clauvelin, B Audoly, S Neukirch
Journal of computer-aided materials design 14, 95-101, 2007
42007
emDNA–A Tool for Modeling Protein-decorated DNA Loops and Minicircles at the Base-pair Step Level
RT Young, N Clauvelin, WK Olson
Journal of molecular biology 434 (11), 167558, 2022
32022
Effect of the boundary conditions and influence of the rotational inertia on the vibrational modes of an elastic ring
N Clauvelin, WK Olson, I Tobias
Journal of Elasticity 115, 193-224, 2014
32014
Opposite effects of histone H1 and HMGN5 protein on distant interactions in chromatin
EV Nizovtseva, YS Polikanov, OI Kulaeva, N Clauvelin, YV Postnikov, ...
Molecular Biology 53, 912-921, 2019
22019
DNA Looping and Genome Architecture: How Proteins can Connect and Organize Chromosomes
N Clauvelin, WK Olson
Biophysical Journal 108 (2), 399a, 2015
22015
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Articles 1–20