| Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors A Kallioniemi, OP Kallioniemi, D Sudar, D Rutovitz, JW Gray, F Waldman, ... Science 258 (5083), 818-821, 1992 | 4491 | 1992 |
| High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays D Pinkel, R Segraves, D Sudar, S Clark, I Poole, D Kowbel, C Collins, ... Nature genetics 20 (2), 207-211, 1998 | 2907 | 1998 |
| The human tumor atlas network: charting tumor transitions across space and time at single-cell resolution O Rozenblatt-Rosen, A Regev, P Oberdoerffer, T Nawy, A Hupalowska, ... Cell 181 (2), 236-249, 2020 | 441 | 2020 |
| The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ... Cell systems 6 (1), 13-24, 2018 | 425 | 2018 |
| Comparative genomic hybridization: a rapid new method for detecting and mapping DNA amplification in tumors. OP Kallioniemi, A Kallioniemi, D Sudar, D Rutovitz, JW Gray, F Waldman, ... Seminars in cancer biology 4 (1), 41-46, 1993 | 338 | 1993 |
| Computer image analysis of comparative genomic hybridization J Piper, D Rutovitz, D Sudar, A Kallioniemi, OP Kallioniemi, FM Waldman, ... Cytometry: The Journal of the International Society for Analytical Cytology …, 1995 | 336 | 1995 |
| Segmentation of confocal microscope images of cell nuclei in thick tissue sections C Ortiz de Solorzano, E Garcia Rodriguez, A Jones, D Pinkel, JW Gray, ... Journal of Microscopy 193 (3), 212-226, 1999 | 204 | 1999 |
| Three-dimensional morphology and gene expression in the Drosophilablastoderm at cellular resolution I: data acquisition pipeline CL Luengo Hendriks, SVE Keränen, CC Fowlkes, L Simirenko, GH Weber, ... Genome biology 7, 1-21, 2006 | 167 | 2006 |
| Data file standard for flow cytometry, version FCS 3.1 J Spidlen, W Moore, D Parks, M Goldberg, C Bray, P Bierre, P Gorombey, ... Cytometry Part A: The Journal of the International Society for Advancement …, 2010 | 111 | 2010 |
| Three-dimensional morphology and gene expression in the Drosophilablastoderm at cellular resolution II: dynamics SVE Keränen, CC Fowlkes, CL Luengo Hendriks, D Sudar, DW Knowles, ... Genome biology 7, 1-17, 2006 | 107 | 2006 |
| Hardware and software requirements for quantitative analysis of comparative genomic hybridization S du Manoir, OP Kallioniemi, P Lichter, J Piper, PA Benedetti, ... Cytometry: The Journal of the International Society for Analytical Cytology …, 1995 | 106 | 1995 |
| Microenvironment-mediated mechanisms of resistance to HER2 inhibitors differ between HER2+ breast cancer subtypes SS Watson, M Dane, K Chin, Z Tatarova, M Liu, T Liby, W Thompson, ... Cell systems 6 (3), 329-342. e6, 2018 | 87 | 2018 |
| PointCloudXplore: Visual analysis of 3D gene expression data using physical views and parallel coordinates. O Rübel, GH Weber, SVE Keränen, CC Fowlkes, CLL Hendriks, ... EuroVis, 203-210, 2006 | 85 | 2006 |
| Automated local bright feature image analysis of nuclear protein distribution identifies changes in tissue phenotype DW Knowles, D Sudar, C Bator-Kelly, MJ Bissell, SA Lelièvre Proceedings of the National Academy of Sciences 103 (12), 4445-4450, 2006 | 71 | 2006 |
| Efficient, interactive, and three‐dimensional segmentation of cell nuclei in thick tissue sections SJ Lockett, D Sudar, CT Thompson, D Pinkel, JW Gray Cytometry: The Journal of the International Society for Analytical Cytology …, 1998 | 65 | 1998 |
| QUAREP‐LiMi: A community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy G Nelson, U Boehm, S Bagley, P Bajcsy, J Bischof, CM Brown, A Dauphin, ... Journal of microscopy 284 (1), 56-73, 2021 | 56 | 2021 |
| MITI minimum information guidelines for highly multiplexed tissue images D Schapiro, C Yapp, A Sokolov, SM Reynolds, YA Chen, D Sudar, Y Xie, ... Nature methods 19 (3), 262-267, 2022 | 53 | 2022 |
| Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model M Hammer, M Huisman, A Rigano, U Boehm, JJ Chambers, N Gaudreault, ... Nature methods 18 (12), 1427-1440, 2021 | 50 | 2021 |
| Proposed standard for image cytometry data files P Dean, L Mascio, D Ow, D Sudar, J Mullikin Cytometry: The Journal of the International Society for Analytical Cytology …, 1990 | 45 | 1990 |
| Digital fluorescence imaging using cooled CCD array cameras invisible LJ Van Vliet, D Sudar, IT Young Cell Biol 3, 109-120, 1998 | 43 | 1998 |
