Benjamin P Kellman
Benjamin P Kellman
Graduate student in Bioinformatics, UC San Diego
Verified email at eng.ucsd.edu - Homepage
Title
Cited by
Cited by
Year
A systematic evaluation of methods for tailoring genome-scale metabolic models
S Opdam, A Richelle, B Kellman, S Li, DC Zielinski, NE Lewis
Cell systems 4 (3), 318-329. e6, 2017
902017
Human milk oligosaccharide composition predicts risk of necrotising enterocolitis in preterm infants
CA Autran, BP Kellman, JH Kim, E Asztalos, AB Blood, ECH Spence, ...
Gut 67 (6), 1064-1070, 2018
862018
Evolution of the exclusively human pathogen Neisseria gonorrhoeae: Human‐specific engagement of immunoregulatory Siglecs
CS Landig, A Hazel, BP Kellman, JJ Fong, F Schwarz, S Agarwal, N Varki, ...
Evolutionary applications 12 (2), 337-349, 2019
152019
A perturbed gene network containing PI3K/AKT, RAS/ERK, WNT/β-catenin pathways in leukocytes is linked to ASD genetics and symptom severity
VH Gazestani, T Pramparo, S Nalabolu, BP Kellman, S Murray, L Lopez, ...
bioRxiv, 435917, 2019
132019
SARS-CoV-2 Infection depends on cellular Heparan Sulfate and ACE2
TM Clausen, DR Sandoval, CB Spliid, J Pihl, HR Perrett, CD Painter, ...
Cell, 2020
72020
Virus-receptor interactions of glycosylated SARS-CoV-2 spike and human ACE2 receptor
P Zhao, JL Praissman, OC Grant, Y Cai, T Xiao, KE Rosenbalm, K Aoki, ...
Cell Host & Microbe, 2020
62020
A Markov model of glycosylation elucidates isozyme specificity and glycosyltransferase interactions for glycoengineering
C Liang, AWT Chiang, AH Hansen, J Arnsdorf, S Schoffelen, ...
Current Research in Biotechnology 2, 22-36, 2020
52020
Optimization of carbon and energy utilization through differential translational efficiency
MM Al-Bassam, JN Kim, LS Zaramela, BP Kellman, C Zuniga, ...
Nature communications 9 (1), 1-13, 2018
52018
Combating viral contaminants in CHO cells by engineering innate immunity
AWT Chiang, S Li, BP Kellman, G Chattopadhyay, Y Zhang, CC Kuo, ...
Scientific reports 9 (1), 1-15, 2019
32019
ZNF263 is a transcriptional regulator of heparin and heparan sulfate biosynthesis
RJ Weiss, PN Spahn, AG Toledo, AWT Chiang, BP Kellman, J Li, ...
Proceedings of the National Academy of Sciences 117 (17), 9311-9317, 2020
12020
NCBI’s Virus Discovery Hackathon: Engaging Research Communities to Identify Cloud Infrastructure Requirements
R Connor, R Brister, JP Buchmann, W Deboutte, R Edwards, ...
Genes 10 (9), 714, 2019
12019
Elucidate Glycosyltransferase Specificities And Interactions for Rational Glycoengineering
C Liang, AWT Chiang, AH Hansen, J Arnsdorf, S Schoffelen, ...
The FASEB Journal 34 (S1), 1-1, 2020
2020
Systems Glycoengineering: Integrated Analyses of Glycomics, Transcriptomics and Phenotypic Data Reveal Complex Cellular Response to Glycoengineering in CHO Cells
WT Chiang, VH Gazestani, B Bao, C Liang, JT Sorrention, BP Kellman, ...
The FASEB Journal 34 (S1), 1-1, 2020
2020
Protein structure, a new constraint for glycosyltransferase specificity: Template‐like association between the glycoprotein surface on glycan structure
BP Kellman, NE Lewis
The FASEB Journal 34 (S1), 1-1, 2020
2020
Genome wide analysis of heparan sulfate assembly
JD Esko, RJ Weiss, P Spahn, AG Toledo, AWT Chiang, BP Kellman, J Li, ...
The FASEB Journal 34 (S1), 1-1, 2020
2020
Elucidating Human Milk Oligosaccharide biosynthetic genes through network-based multi-omics integration
BP Kellman, A Richelle, JYE Yang, DG Chapla, AWT Chiang, J Najera, ...
bioRxiv, 2020
2020
Bacterial modification of the host glycosaminoglycan heparan sulfate modulates SARS-CoV-2 infectivity
C Martino, BP Kellman, DR Sandoval, TM Clausen, CA Marotz, SJ Song, ...
bioRxiv, 2020
2020
A consensus-based and readable extension of Linear Code for Reaction Rules (LiCoRR)
BP Kellman, Y Zhang, E Logomasini, E Meinhardt, AWT Chiang, ...
BioRxiv, 2020
2020
What does your cell really do? Model-based assessment of mammalian cells metabolic functionalities using omics data
A Richelle, BP Kellman, AT Wenzel, AWT Chiang, T Reagan, ...
bioRxiv, 2020
2020
Multiple freeze-thaw cycles lead to a loss of consistency in poly (A)-enriched RNA sequencing
BP Kellman, HM Baghdassarian, T Pramparo, I Shamie, VH Gazestani, ...
BioRxiv, 2020
2020
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