Rick Stevens
Rick Stevens
Professor of Computer Science, University of Chicago
Verified email at ci.uchicago.edu
Title
Cited by
Cited by
Year
The RAST Server: rapid annotations using subsystems technology
RK Aziz, D Bartels, AA Best, M DeJongh, T Disz, RA Edwards, K Formsma, ...
BMC genomics 9 (1), 1-15, 2008
74292008
Studies on prostatic cancer
C Huggins, CV Hodges
Cancer Res 1, 297, 1941
5119*1941
The metagenomics RAST server–a public resource for the automatic phylogenetic and functional analysis of metagenomes
F Meyer, D Paarmann, M D'Souza, R Olson, EM Glass, M Kubal, ...
BMC bioinformatics 9 (1), 1-8, 2008
29992008
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
R Overbeek, R Olson, GD Pusch, GJ Olsen, JJ Davis, T Disz, RA Edwards, ...
Nucleic acids research 42 (D1), D206-D214, 2014
23232014
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ...
Nucleic acids research 33 (17), 5691-5702, 2005
17892005
Functional metagenomic profiling of nine biomes
EA Dinsdale, RA Edwards, D Hall, F Angly, M Breitbart, JM Brulc, ...
Nature 452 (7187), 629-632, 2008
9262008
High-throughput generation, optimization and analysis of genome-scale metabolic models
CS Henry, M DeJongh, AA Best, PM Frybarger, B Linsay, RL Stevens
Nature biotechnology 28 (9), 977-982, 2010
8212010
PATRIC, the bacterial bioinformatics database and analysis resource
AR Wattam, D Abraham, O Dalay, TL Disz, T Driscoll, JL Gabbard, ...
Nucleic acids research 42 (D1), D581-D591, 2014
8072014
The international exascale software project roadmap
J Dongarra, P Beckman, T Moore, P Aerts, G Aloisio, JC Andre, D Barkai, ...
The international journal of high performance computing applications 25 (1†…, 2011
7762011
RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes
T Brettin, JJ Davis, T Disz, RA Edwards, S Gerdes, GJ Olsen, R Olson, ...
Scientific reports 5, 8365, 2015
7292015
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
6402017
Improvements to PATRIC, the all-bacterial bioinformatics database and analysis resource center
AR Wattam, JJ Davis, R Assaf, S Boisvert, T Brettin, C Bun, N Conrad, ...
Nucleic acids research 45 (D1), D535-D542, 2017
5372017
Portable programs for parallel processors
E Lusk, J Boyle, R Butler, T Disz, B Glickfeld, R Overbeek, J Patterson, ...
Holt, Rinehart & Winston, 1988
5031988
The Aurora or-parallel Prolog system
E Lusk, R Butler, T Disz, R Olson, R Overbeek, R Stevens, DHD Warren, ...
New Generation Computing 7 (2-3), 243-271, 1990
4131990
Planning for big data
E Dumbill
Sebastopol, 2012
367*2012
Overview of the I-WAY: Wide-area visual supercomputing
TA DeFanti, I Foster, ME Papka, R Stevens, T Kuhfuss
The International Journal of Supercomputer Applications and High Performance†…, 1996
2801996
Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project
JA Gilbert, F Meyer, D Antonopoulos, P Balaji, CT Brown, CT Brown, ...
Standards in genomic sciences 3 (3), 243-248, 2010
2412010
Unlocking the potential of metagenomics through replicated experimental design
R Knight, J Jansson, D Field, N Fierer, N Desai, JA Fuhrman, ...
Nature biotechnology 30 (6), 513-520, 2012
2402012
Access grid: Immersive group-to-group collaborative visualization
L Childers, T Disz, R Olson, ME Papka, R Stevens, T Udeshi
Argonne National Lab., IL (US), 2000
2302000
The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes
FE Angly, D Willner, A Prieto-Davů, RA Edwards, R Schmieder, ...
PLoS Comput Biol 5 (12), e1000593, 2009
2092009
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