Aleksey Penin
Aleksey Penin
The Institute for Information Transmission Problems of the Russian Academy of Sciences
Verified email at de.bio.msu.ru - Homepage
Title
Cited by
Cited by
Year
A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA‐seq profiling
AV Klepikova, AS Kasianov, ES Gerasimov, MD Logacheva, AA Penin
The Plant Journal 88 (6), 1058-1070, 2016
2662016
Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains
SV Ulianov, EE Khrameeva, AA Gavrilov, IM Flyamer, P Kos, ...
Genome research 26 (1), 70-84, 2016
2582016
De novo sequencing and characterization of floral transcriptome in two species of buckwheat (Fagopyrum)
MD Logacheva, AS Kasianov, DV Vinogradov, TH Samigullin, ...
BMC genomics 12 (1), 1-17, 2011
1492011
Selection and validation of reference genes for quantitative real-time PCR in buckwheat (Fagopyrum esculentum) based on transcriptome sequence data
NV Demidenko, MD Logacheva, AA Penin
PloS one 6 (5), e19434, 2011
1102011
Sequencing and Analysis of Plastid Genome in Mycoheterotrophic Orchid Neottia nidus-avis
MD Logacheva, MI Schelkunov, AA Penin
Genome Biology and Evolution 3, 1296, 2011
1062011
Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge
O Gusev, Y Suetsugu, R Cornette, T Kawashima, MD Logacheva, ...
Nature communications 5 (1), 1-9, 2014
1042014
Fast Evolution from Precast Bricks: Genomics of Young Freshwater Populations of Threespine Stickleback Gasterosteus aculeatus
NV Terekhanova, MD Logacheva, AA Penin, TV Neretina, ...
PLoS Genetics 10 (10), e1004696, 2014
1002014
Paratrypanosoma Is a Novel Early-Branching Trypanosomatid
P Flegontov, J Votępka, T Skalickę, MD Logacheva, AA Penin, G Tanifuji, ...
Current Biology, 2013
962013
Exploring the Limits for Reduction of Plastid Genomes: A Case Study of the Mycoheterotrophic Orchids Epipogium aphyllum and Epipogium roseum
MI Schelkunov, VY Shtratnikova, MS Nuraliev, MA Selosse, AA Penin, ...
Genome biology and evolution 7 (4), 1179-1191, 2015
922015
Comparative chloroplast genomics and phylogenetics of Fagopyrum esculentum ssp. ancestrale–A wild ancestor of cultivated buckwheat
MD Logacheva, TH Samigullin, A Dhingra, AA Penin
BMC plant biology 8 (1), 59, 2008
682008
The Plastid Genome of Mycoheterotrophic Monocot Petrosavia stellaris Exhibits Both Gene Losses and Multiple Rearrangements
MD Logacheva, MI Schelkunov, MS Nuraliev, TH Samigullin, AA Penin
Genome biology and evolution 6 (1), 238-246, 2014
672014
The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences
EV Leushkin, RA Sutormin, ER Nabieva, AA Penin, AS Kondrashov, ...
BMC Genomics 14 (1), 476, 2013
652013
RNA-seq analysis of an apical meristem time series reveals a critical point in Arabidopsis thaliana flower initiation
AV Klepikova, MD Logacheva, SE Dmitriev, AA Penin
BMC Genomics 16 (466), 1-15, 2015
532015
Architectural proteins Pita, Zw5, and ZIPIC contain homodimerization domain and support specific long-range interactions in Drosophila
N Zolotarev, A Fedotova, O Kyrchanova, A Bonchuk, AA Penin, AS Lando, ...
Nucleic acids research 44 (15), 7228-7241, 2016
432016
Transcriptome‐based phylogeny of endemic Lake Baikal amphipod species flock: fast speciation accompanied by frequent episodes of positive selection
SA Naumenko, MD Logacheva, NV Popova, AV Klepikova, AA Penin, ...
Molecular ecology 26 (2), 536-553, 2017
412017
The genome of Intoshia linei affirms orthonectids as highly simplified spiralians
KV Mikhailov, GS Slyusarev, MA Nikitin, MD Logacheva, AA Penin, ...
Current Biology 26 (13), 1768-1774, 2016
392016
Complete Plastid Genome of the Recent Holoparasite Lathraea squamaria Reveals Earliest Stages of Plastome Reduction in Orobanchaceae
TH Samigullin, MD Logacheva, AA Penin, CM Vallejo-Roman
PloS one 11 (3), e0150718, 2016
382016
Comparative analysis of plastid genomes of non-photosynthetic Ericaceae and their photosynthetic relatives
MD Logacheva, MI Schelkunov, VY Shtratnikova, MV Matveeva, AA Penin
Scientific Reports 6 (1), 1-14, 2016
362016
Phylogeny of flowering plants by the chloroplast genome sequences: in search of a “Lucky Gene”
MD Logacheva, AA Penin, TH Samigullin, CM Vallejo-Roman, ...
Biochemistry (Moscow) 72 (12), 1324-1330, 2007
332007
A sustained deficiency of mitochondrial respiratory complex III induces an apoptotic cell death through the p53-mediated inhibition of pro-survival activities of the activating …
AG Evstafieva, AA Garaeva, AA Khutornenko, AV Klepikova, ...
Cell death & disease 5 (11), e1511-e1511, 2014
312014
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