Aleksey Penin
Aleksey Penin
The Institute for Information Transmission Problems of the Russian Academy of Sciences
Verified email at - Homepage
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A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA‐seq profiling
AV Klepikova, AS Kasianov, ES Gerasimov, MD Logacheva, AA Penin
The Plant Journal 88 (6), 1058-1070, 2016
Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains
SV Ulianov, EE Khrameeva, AA Gavrilov, IM Flyamer, P Kos, ...
Genome research 26 (1), 70-84, 2016
De novo sequencing and characterization of floral transcriptome in two species of buckwheat (Fagopyrum)
MD Logacheva, AS Kasianov, DV Vinogradov, TH Samigullin, ...
BMC genomics 12 (1), 1-17, 2011
Selection and validation of reference genes for quantitative real-time PCR in buckwheat (Fagopyrum esculentum) based on transcriptome sequence data
NV Demidenko, MD Logacheva, AA Penin
PloS one 6 (5), e19434, 2011
Sequencing and Analysis of Plastid Genome in Mycoheterotrophic Orchid Neottia nidus-avis
MD Logacheva, MI Schelkunov, AA Penin
Genome Biology and Evolution 3, 1296, 2011
Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge
O Gusev, Y Suetsugu, R Cornette, T Kawashima, MD Logacheva, ...
Nature communications 5 (1), 1-9, 2014
Fast Evolution from Precast Bricks: Genomics of Young Freshwater Populations of Threespine Stickleback Gasterosteus aculeatus
NV Terekhanova, MD Logacheva, AA Penin, TV Neretina, ...
PLoS Genetics 10 (10), e1004696, 2014
Paratrypanosoma Is a Novel Early-Branching Trypanosomatid
P Flegontov, J Votępka, T Skalickę, MD Logacheva, AA Penin, G Tanifuji, ...
Current Biology, 2013
Exploring the Limits for Reduction of Plastid Genomes: A Case Study of the Mycoheterotrophic Orchids Epipogium aphyllum and Epipogium roseum
MI Schelkunov, VY Shtratnikova, MS Nuraliev, MA Selosse, AA Penin, ...
Genome biology and evolution 7 (4), 1179-1191, 2015
Comparative chloroplast genomics and phylogenetics of Fagopyrum esculentum ssp. ancestrale–A wild ancestor of cultivated buckwheat
MD Logacheva, TH Samigullin, A Dhingra, AA Penin
BMC plant biology 8 (1), 59, 2008
The Plastid Genome of Mycoheterotrophic Monocot Petrosavia stellaris Exhibits Both Gene Losses and Multiple Rearrangements
MD Logacheva, MI Schelkunov, MS Nuraliev, TH Samigullin, AA Penin
Genome biology and evolution 6 (1), 238-246, 2014
The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences
EV Leushkin, RA Sutormin, ER Nabieva, AA Penin, AS Kondrashov, ...
BMC Genomics 14 (1), 476, 2013
RNA-seq analysis of an apical meristem time series reveals a critical point in Arabidopsis thaliana flower initiation
AV Klepikova, MD Logacheva, SE Dmitriev, AA Penin
BMC Genomics 16 (466), 1-15, 2015
Architectural proteins Pita, Zw5, and ZIPIC contain homodimerization domain and support specific long-range interactions in Drosophila
N Zolotarev, A Fedotova, O Kyrchanova, A Bonchuk, AA Penin, AS Lando, ...
Nucleic acids research 44 (15), 7228-7241, 2016
Transcriptome‐based phylogeny of endemic Lake Baikal amphipod species flock: fast speciation accompanied by frequent episodes of positive selection
SA Naumenko, MD Logacheva, NV Popova, AV Klepikova, AA Penin, ...
Molecular ecology 26 (2), 536-553, 2017
The genome of Intoshia linei affirms orthonectids as highly simplified spiralians
KV Mikhailov, GS Slyusarev, MA Nikitin, MD Logacheva, AA Penin, ...
Current Biology 26 (13), 1768-1774, 2016
Complete Plastid Genome of the Recent Holoparasite Lathraea squamaria Reveals Earliest Stages of Plastome Reduction in Orobanchaceae
TH Samigullin, MD Logacheva, AA Penin, CM Vallejo-Roman
PloS one 11 (3), e0150718, 2016
Comparative analysis of plastid genomes of non-photosynthetic Ericaceae and their photosynthetic relatives
MD Logacheva, MI Schelkunov, VY Shtratnikova, MV Matveeva, AA Penin
Scientific Reports 6 (1), 1-14, 2016
Phylogeny of flowering plants by the chloroplast genome sequences: in search of a “Lucky Gene”
MD Logacheva, AA Penin, TH Samigullin, CM Vallejo-Roman, ...
Biochemistry (Moscow) 72 (12), 1324-1330, 2007
A sustained deficiency of mitochondrial respiratory complex III induces an apoptotic cell death through the p53-mediated inhibition of pro-survival activities of the activating …
AG Evstafieva, AA Garaeva, AA Khutornenko, AV Klepikova, ...
Cell death & disease 5 (11), e1511-e1511, 2014
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