Chromosome organization by one-sided and two-sided loop extrusion EJ Banigan, AA van den Berg, HB Brandão, JF Marko, LA Mirny bioRxiv, 815340, 2019 | 125 | 2019 |
Transcription shapes 3D chromatin organization by interacting with loop extrusion EJ Banigan, W Tang, AA van den Berg, RR Stocsits, G Wutz, HB Brandão, ... Proceedings of the National Academy of Sciences 120 (11), e2210480120, 2023 | 120 | 2023 |
RNA polymerases as moving barriers to condensin loop extrusion HB Brandão, P Paul, AA van den Berg, DZ Rudner, X Wang, LA Mirny Proceedings of the National Academy of Sciences 116 (41), 20489-20499, 2019 | 116 | 2019 |
Slow unloading leads to DNA-bound β2-sliding clamp accumulation in live Escherichia coli cells MC Moolman, ST Krishnan, JWJ Kerssemakers, A Van Den Berg, ... Nature communications 5 (1), 5820, 2014 | 75 | 2014 |
Single pairs of time-bin-entangled photons MAM Versteegh, ME Reimer, AA van den Berg, G Juska, ... Physical Review A 92 (3), 033802, 2015 | 45 | 2015 |
Crowding-induced transcriptional bursts dictate polymerase and nucleosome density profiles along genes AA van den Berg, M Depken Nucleic acids research 45 (13), 7623-7632, 2017 | 15 | 2017 |
Resolving the subtle details of human DNA alkyltransferase lesion search and repair mechanism by single-molecule studies S Kono, A van den Berg, M Simonetta, A Mukhortava, EF Garman, ... Proceedings of the National Academy of Sciences 119 (11), e2116218119, 2022 | 12 | 2022 |
When motors collide: how transcription and loop-extruding cohesins organize chromatin E Banigan, W Tang, A van den Berg, R Stocsits, G Wutz, H Brandão, ... APS March Meeting Abstracts 2022, W06. 005, 2022 | 1 | 2022 |
Crowding on DNA as a Source of Bursts in mRNA Production AA van den Berg, SM Depken Biophysical Journal 108 (2), 535a, 2015 | 1 | 2015 |
Transcription is a moving barrier to loop extrusion that shapes the genome E Banigan, W Tang, A van den Berg, R Stocsits, G Wutz, H Brandão, ... APS March Meeting Abstracts 2023, S08. 005, 2023 | | 2023 |
RNAP as a Moving Barrier to Loop Extrusion AA van den Berg, G Wutz, RR Stocsits, H Brandao, G Busslinger, ... Biophysical Journal 116 (3), 22a, 2019 | | 2019 |
The structural consequences of one-sided loop extrusion E Banigan, A van den Berg, H Brandao, J Marko, L Mirny APS March Meeting Abstracts 2019, S65. 007, 2019 | | 2019 |
The interplay between polymerase organization and nucleosome occupancy along DNA: How dynamic roadblocks on the DNA induce the formation of RNA polymerase pelotons AA van den Berg | | 2017 |
Supporting Information for: RNA polymerases as moving barriers to condensin loop extrusion HB Brandão, P Paul, A van den Berg, DZ Rudner, X Wang, LA Mirny | | |
Supplementary material Crowding-induced transcriptional bursts dictate polymerase and nucleocome density profiles along genes AA van den Berg, M Depken | | |