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Jonathan Keith
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Methods for identifying SNP interactions: a review on variations of Logic Regression, Random Forest and Bayesian logistic regression
CCM Chen, H Schwender, J Keith, R Nunkesser, K Mengersen, ...
IEEE/ACM transactions on computational biology and bioinformatics 8 (6 …, 2011
1142011
Agent-based models of malaria transmission: a systematic review
NR Smith, JM Trauer, M Gambhir, JS Richards, RJ Maude, JM Keith, ...
Malaria journal 17 (1), 1-16, 2018
902018
Searching for convergence in phylogenetic Markov chain Monte Carlo
RG Beiko, JM Keith, TJ Harlow, MA Ragan
Systematic biology 55 (4), 553-565, 2006
702006
A simulated annealing algorithm for finding consensus sequences
JM Keith, P Adams, D Bryant, DP Kroese, KR Mitchelson, DAE Cochran, ...
Bioinformatics 18 (11), 1494-1499, 2002
602002
Sequence alignment by rare event simulation
J Keith, DP Kroese
Proceedings of the Winter Simulation Conference 1, 320-327, 2002
582002
Agent-based Bayesian approach to monitoring the progress of invasive species eradication programs
JM Keith, D Spring
Proceedings of the National Academy of Sciences 110 (33), 13428-13433, 2013
512013
Adaptive independence samplers
JM Keith, DP Kroese, GY Sofronov
Statistics and Computing 18, 409-420, 2008
482008
Method for sequence analysis
J Keith, D Bryant, P Adams
US Patent App. 10/673,938, 2004
462004
Unlocking hidden genomic sequence
JM Keith, DAE Cochran, GH Lala, P Adams, D Bryant, KR Mitchelson
Nucleic acids research 32 (3), e35-e35, 2004
432004
Recent advances and future perspectives for automated parameterisation, Bayesian inference and machine learning in voltammetry
L Gundry, SX Guo, G Kennedy, J Keith, M Robinson, D Gavaghan, ...
Chemical Communications 57 (15), 1855-1870, 2021
412021
A generalized Markov sampler
JM Keith, DP Kroese, D Bryant
Methodology and Computing in Applied Probability 6, 29-53, 2004
412004
Estimating change-points in biological sequences via the cross-entropy method
GE Evans, GY Sofronov, JM Keith, DP Kroese
Annals of Operations Research 189, 155-165, 2011
392011
Influencing public health policy with data-informed mathematical models of infectious diseases: Recent developments and new challenges
A Alahmadi, S Belet, A Black, D Cromer, JA Flegg, T House, ...
Epidemics 32, 100393, 2020
372020
Linking species richness and size diversity in birds and fishes
JDL Yen, JR Thomson, JM Keith, DM Paganin, E Fleishman, AF Bennett, ...
Ecography 41 (12), 1979-1991, 2018
342018
Segmenting eukaryotic genomes with the generalized Gibbs sampler
JM Keith
Journal of Computational Biology 13 (7), 1369-1383, 2006
332006
Function regression in ecology and evolution: FREE
JDL Yen, JR Thomson, DM Paganin, JM Keith, R Mac Nally
Methods in Ecology and Evolution 6 (1), 17-26, 2015
282015
Calculation of IBD probabilities with dense SNP or sequence data
JM Keith, A McRae, D Duffy, K Mengersen, PM Visscher
Genetic Epidemiology: The Official Publication of the International Genetic …, 2008
282008
A comparison of approximate versus exact techniques for Bayesian parameter inference in nonlinear ordinary differential equation models
AA Alahmadi, JA Flegg, DG Cochrane, CC Drovandi, JM Keith
Royal Society open science 7 (3), 191315, 2020
252020
Parallel cross-entropy optimization
GE Evans, JM Keith, DP Kroese
2007 Winter Simulation Conference, 2196-2202, 2007
252007
Identifying change-points in biological sequences via sequential importance sampling
GY Sofronov, GE Evans, JM Keith, DP Kroese
Environmental Modeling & Assessment 14, 577-584, 2009
232009
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Articles 1–20