Alexey Kazakov
Alexey Kazakov
Verified email at lbl.gov
Title
Cited by
Cited by
Year
RegPrecise 3.0–a resource for genome-scale exploration of transcriptional regulation in bacteria
PS Novichkov, AE Kazakov, DA Ravcheev, SA Leyn, GY Kovaleva, ...
BMC genomics 14 (1), 745, 2013
2152013
Alpha-satellite DNA of primates: old and new families
I Alexandrov, A Kazakov, I Tumeneva, V Shepelev, Y Yurov
Chromosoma 110 (4), 253-266, 2001
1492001
Low‐molecular‐weight post‐translationally modified microcins
K Severinov, E Semenova, A Kazakov, T Kazakov, MS Gelfand
Molecular microbiology 65 (6), 1380-1394, 2007
1362007
RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach
PS Novichkov, DA Rodionov, ED Stavrovskaya, ES Novichkova, ...
Nucleic acids research 38 (suppl_2), W299-W307, 2010
1292010
Transcriptional regulation of central carbon and energy metabolism in bacteria by redox-responsive repressor Rex
DA Ravcheev, X Li, H Latif, K Zengler, SA Leyn, YD Korostelev, ...
Journal of bacteriology 194 (5), 1145-1157, 2012
1062012
RegTransBase—a database of regulatory sequences and interactions in a wide range of prokaryotic genomes
AE Kazakov, MJ Cipriano, PS Novichkov, S Minovitsky, DV Vinogradov, ...
Nucleic acids research 35 (suppl_1), D407-D412, 2007
1042007
Comparative genomics of regulation of fatty acid and branched-chain amino acid utilization in proteobacteria
AE Kazakov, DA Rodionov, E Alm, AP Arkin, I Dubchak, MS Gelfand
Journal of bacteriology 191 (1), 52-64, 2009
952009
Comparative genomics of regulation of heavy metal resistance in Eubacteria
EA Permina, AE Kazakov, OV Kalinina, MS Gelfand
BMC microbiology 6 (1), 49, 2006
882006
A cosmid and cDNA fine physical map of a human chromosome 13q14 region frequently lost in B‐cell chronic lymphocytic leukemia and identification of a new putative tumor …
B Kapanadze, V Kashuba, A Baranova, O Rasool, W van Everdink, Y Liu, ...
FEBS letters 426 (2), 266-270, 1998
771998
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C
M Novikova, A Metlitskaya, K Datsenko, T Kazakov, A Kazakov, B Wanner, ...
Journal of bacteriology 189 (22), 8361-8365, 2007
732007
Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus
DA Rodionov, PS Novichkov, ED Stavrovskaya, IA Rodionova, X Li, ...
BMC genomics 12 (S1), S3, 2011
602011
RegTransBase–a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes
MJ Cipriano, PN Novichkov, AE Kazakov, DA Rodionov, AP Arkin, ...
BMC genomics 14 (1), 213, 2013
522013
Comparative genomics of the dormancy regulons in mycobacteria
A Gerasimova, AE Kazakov, AP Arkin, I Dubchak, MS Gelfand
Journal of bacteriology 193 (14), 3446-3452, 2011
472011
Bioinformatics classification and functional analysis of PhoH homologs
AE Kazakov, O Vassieva, MS Gelfand, A Osterman, R Overbeek
In silico biology 3 (1, 2), 3-15, 2003
432003
Functional genomics with a comprehensive library of transposon mutants for the sulfate-reducing bacterium Desulfovibrio alaskensis G20
JV Kuehl, MN Price, J Ray, KM Wetmore, Z Esquivel, AE Kazakov, ...
MBio 5 (3), e01041-14, 2014
382014
Functional genomics with a comprehensive library of transposon mutants for the sulfate-reducing bacterium Desulfovibrio alaskensis G20
JV Kuehl, MN Price, J Ray, KM Wetmore, Z Esquivel, AE Kazakov, ...
MBio 5 (3), e01041-14, 2014
382014
Rex (encoded by DVU_0916) in Desulfovibrio vulgaris Hildenborough is a repressor of sulfate adenylyl transferase and is regulated by NADH
GA Christensen, GM Zane, AE Kazakov, X Li, DA Rodionov, ...
Journal of bacteriology 197 (1), 29-39, 2015
212015
Interspersed repeats are found predominantly in the “old” α satellite families
AE Kazakov, VA Shepelev, IG Tumeneva, AA Alexandrov, YB Yurov, ...
Genomics 82 (6), 619-627, 2003
202003
Regulation of nitrite stress response in Desulfovibrio vulgaris Hildenborough, a model sulfate-reducing bacterium
L Rajeev, A Chen, AE Kazakov, EG Luning, GM Zane, PS Novichkov, ...
Journal of bacteriology 197 (21), 3400-3408, 2015
152015
New family of tungstate-responsive transcriptional regulators in sulfate-reducing bacteria
AE Kazakov, L Rajeev, EG Luning, GM Zane, K Siddartha, DA Rodionov, ...
Journal of bacteriology 195 (19), 4466-4475, 2013
152013
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Articles 1–20