Barak Raveh
Barak Raveh
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Sub‐angstrom modeling of complexes between flexible peptides and globular proteins
B Raveh, N London, O Schueler‐Furman
Proteins: Structure, Function, and Bioinformatics 78 (9), 2029-2040, 2010
Rosetta FlexPepDock web server—high resolution modeling of peptide–protein interactions
N London, B Raveh, E Cohen, G Fathi, O Schueler-Furman
Nucleic acids research 39 (suppl_2), W249-W253, 2011
Integrative structure and functional anatomy of a nuclear pore complex
SJ Kim, J Fernandez-Martinez, I Nudelman, Y Shi, W Zhang, B Raveh, ...
Nature 555 (7697), 475-482, 2018
Simple rules for passive diffusion through the nuclear pore complex
BL Timney, B Raveh, R Mironska, JM Trivedi, SJ Kim, D Russel, ...
Journal of Cell Biology 215 (1), 57-76, 2016
Rosetta FlexPepDock ab-initio: simultaneous folding, docking and refinement of peptides onto their receptors
B Raveh, N London, L Zimmerman, O Schueler-Furman
PloS one 6 (4), e18934, 2011
Macromolecular modeling and design in Rosetta: recent methods and frameworks
JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ...
Nature methods 17 (7), 665-680, 2020
Druggable protein–protein interactions–from hot spots to hot segments
N London, B Raveh, O Schueler-Furman
Current opinion in chemical biology 17 (6), 952-959, 2013
Can self‐inhibitory peptides be derived from the interfaces of globular protein–protein interactions?
N London, B Raveh, D Movshovitz‐Attias, O Schueler‐Furman
Proteins: Structure, Function, and Bioinformatics 78 (15), 3140-3149, 2010
Prediction of transition metal‐binding sites from apo protein structures
M Babor, S Gerzon, B Raveh, V Sobolev, M Edelman
Proteins: Structure, Function, and Bioinformatics 70 (1), 208-217, 2008
Peptide docking and structure-based characterization of peptide binding: from knowledge to know-how
N London, B Raveh, O Schueler-Furman
Current opinion in structural biology 23 (6), 894-902, 2013
Slide-and-exchange mechanism for rapid and selective transport through the nuclear pore complex
B Raveh, JM Karp, S Sparks, K Dutta, MP Rout, A Sali, D Cowburn
Proceedings of the National Academy of Sciences 113 (18), E2489-E2497, 2016
Rapid sampling of molecular motions with prior information constraints
B Raveh, A Enosh, O Schueler-Furman, D Halperin
PLoS computational biology 5 (2), e1000295, 2009
A little more, a lot better: Improving path quality by a path-merging algorithm
B Raveh, A Enosh, D Halperin
IEEE Transactions on Robotics 27 (2), 365-371, 2011
Structural basis for chemokine recognition by a G protein–coupled receptor and implications for receptor activation
JJ Ziarek, AB Kleist, N London, B Raveh, N Montpas, J Bonneterre, ...
Science signaling 10 (471), eaah5756, 2017
Modeling of Proteins and Their Assemblies with the Integrative Modeling Platform
B Webb, K Lasker, J Velázquez-Muriel, D Schneidman-Duhovny, ...
Structural Genomics, 277-295, 2014
Allosteric regulation of glycogen synthase kinase 3β: a theoretical study
I Buch, D Fishelovitch, N London, B Raveh, HJ Wolfson, R Nussinov
Biochemistry 49 (51), 10890-10901, 2010
Autophosphorylation activates Dictyostelium myosin II heavy chain kinase A by providing a ligand for an allosteric binding site in the α-kinase domain
SW Crawley, MS Gharaei, Q Ye, Y Yang, B Raveh, N London, ...
Journal of Biological Chemistry 286 (4), 2607-2616, 2011
Motion planning via manifold samples
O Salzman, M Hemmer, B Raveh, D Halperin
Algorithmica 67 (4), 547-565, 2013
Sampling-diagram automata: A tool for analyzing path quality in tree planners
O Nechushtan, B Raveh, D Halperin
Algorithmic Foundations of Robotics IX, 285-301, 2010
Analytical and simulation-based models for drug release and gel-degradation in a tetra-PEG hydrogel drug-delivery system
R Reid, M Sgobba, B Raveh, G Rastelli, A Sali, DV Santi
Macromolecules 48 (19), 7359-7369, 2015
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