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Francesco Napolitano
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Drug repositioning: a machine-learning approach through data integration
F Napolitano, Y Zhao, VM Moreira, R Tagliaferri, J Kere, M D’Amato, ...
Journal of cheminformatics 5, 1-9, 2013
3582013
Goblet cell hyperplasia requires high bicarbonate transport to support mucin release
G Gorrieri, P Scudieri, E Caci, M Schiavon, V Tomati, F Sirci, F Napolitano, ...
Scientific reports 6 (1), 36016, 2016
952016
Computer-aided drug repurposing for cancer therapy: approaches and opportunities to challenge anticancer targets
C Mottini, F Napolitano, Z Li, X Gao, L Cardone
Seminars in cancer biology 68, 59-74, 2021
942021
Mantra 2.0: an online collaborative resource for drug mode of action and repurposing by network analysis
D Carrella, F Napolitano, R Rispoli, M Miglietta, A Carissimo, L Cutillo, ...
Bioinformatics 30 (12), 1787-1788, 2014
852014
Drug-set enrichment analysis: a novel tool to investigate drug mode of action
F Napolitano, F Sirci, D Carrella, D di Bernardo
Bioinformatics 32 (2), 235-241, 2016
812016
gene2drug: a computational tool for pathway-based rational drug repositioning
F Napolitano, D Carrella, B Mandriani, S Pisonero-Vaquero, F Sirci, ...
Bioinformatics 34 (9), 1498-1505, 2018
722018
Data mining in cancer research [application notes]
PJG Lisboa, A Vellido, R Tagliaferri, F Napolitano, M Ceccarelli, ...
IEEE computational intelligence magazine 5 (1), 14-18, 2010
622010
Fat induces glucose metabolism in nontransformed liver cells and promotes liver tumorigenesis
LA Broadfield, JAG Duarte, R Schmieder, D Broekaert, K Veys, M Planque, ...
Cancer research 81 (8), 1988-2001, 2021
562021
Integrative genetic, epigenetic and pathological analysis of paraganglioma reveals complex dysregulation of NOTCH signaling
A Cama, F Verginelli, LV Lotti, F Napolitano, A Morgano, A D’Orazio, ...
Acta Neuropathologica 126, 575-594, 2013
342013
Interactive data analysis and clustering of genomic data
A Ciaramella, S Cocozza, F Iorio, G Miele, F Napolitano, M Pinelli, ...
Neural Networks 21 (2-3), 368-378, 2008
342008
Impact of computational approaches in the fight against COVID-19: an AI guided review of 17 000 studies
F Napolitano, X Xu, X Gao
Briefings in bioinformatics 23 (1), bbab456, 2022
302022
MetaCancer: a deep learning-based pan-cancer metastasis prediction model developed using multi-omics data
S Albaradei, F Napolitano, MA Thafar, T Gojobori, M Essack, X Gao
Computational and Structural Biotechnology Journal 19, 4404-4411, 2021
302021
Clustering and visualization approaches for human cell cycle gene expression data analysis
F Napolitano, G Raiconi, R Tagliaferri, A Ciaramella, A Staiano, G Miele
International Journal of Approximate Reasoning 47 (1), 70-84, 2008
302008
Comparing structural and transcriptional drug networks reveals signatures of drug activity and toxicity in transcriptional responses
F Sirci, F Napolitano, S Pisonero-Vaquero, D Carrella, DL Medina, ...
NPJ systems biology and applications 3 (1), 23, 2017
262017
In silico modeling of liver metabolism in a human disease reveals a key enzyme for histidine and histamine homeostasis
R Pagliarini, R Castello, F Napolitano, R Borzone, P Annunziata, ...
Cell reports 15 (10), 2292-2300, 2016
262016
The Creative Psychosocial and Cultural Genomic Healing Experience: A new top-down epigenomic psychotherapeutic protocol
M Cozzolino, R Tagliaferri, S Castiglione, V Fortino, A Cicatelli, F Guarino, ...
The International Journal of Psychosocial Genomics: Consciousness and Health …, 2014
222014
Transcriptomic analysis identifies organ-specific metastasis genes and pathways across different primary sites
L Zhang, M Fan, F Napolitano, X Gao, Y Xu, L Li
Journal of Translational Medicine 19, 1-11, 2021
212021
Evaluation of a systems biology approach to identify pharmacological correctors of the mutant CFTR chloride channel
E Pesce, G Gorrieri, F Sirci, F Napolitano, D Carrella, E Caci, V Tomati, ...
Journal of Cystic Fibrosis 15 (4), 425-435, 2016
192016
Automatic identification of small molecules that promote cell conversion and reprogramming
F Napolitano, T Rapakoulia, P Annunziata, A Hasegawa, M Cardon, ...
Stem cell reports 16 (5), 1381-1390, 2021
182021
Consensus clustering in gene expression
P Galdi, F Napolitano, R Tagliaferri
Computational Intelligence Methods for Bioinformatics and Biostatistics …, 2015
142015
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Articles 1–20