Thomas Sebastian B. Schmidt
Thomas Sebastian B. Schmidt
Verified email at embl.de - Homepage
Title
Cited by
Cited by
Year
The human gut microbiome: from association to modulation
TSB Schmidt, J Raes, P Bork
Cell 172 (6), 1198-1215, 2018
3312018
Similarity of the dog and human gut microbiomes in gene content and response to diet
LP Coelho, JR Kultima, PI Costea, C Fournier, Y Pan, ...
Microbiome 6 (1), 1-11, 2018
1142018
Microbiota-derived hydrogen fuels Salmonella typhimurium invasion of the gut ecosystem
L Maier, R Vyas, CD Cordova, H Lindsay, TSB Schmidt, S Brugiroux, ...
Cell host & microbe 14 (6), 641-651, 2013
1102013
Microbial abundance, activity and population genomic profiling with mOTUs2
A Milanese, DR Mende, L Paoli, G Salazar, HJ Ruscheweyh, M Cuenca, ...
Nature communications 10 (1), 1-11, 2019
1092019
Extensive transmission of microbes along the gastrointestinal tract
TSB Schmidt, MR Hayward, LP Coelho, SS Li, PI Costea, AY Voigt, ...
Elife 8, e42693, 2019
1032019
Pseudo-transition analysis identifies the key regulators of dynamic metabolic adaptations from steady-state data
L Gerosa, BRBH van Rijsewijk, D Christodoulou, K Kochanowski, ...
Cell systems 1 (4), 270-282, 2015
992015
Ecological consistency of SSU rRNA-based operational taxonomic units at a global scale
TSB Schmidt, JF Matias Rodrigues, C Von Mering
PLoS computational biology 10 (4), e1003594, 2014
952014
Limits to robustness and reproducibility in the demarcation of operational taxonomic units
TSB Schmidt, JF Matias Rodrigues, C von Mering
Environmental microbiology 17 (5), 1689-1706, 2015
922015
Analyses of dryland biological soil crusts highlight lichens as an important regulator of microbial communities
S Maier, TSB Schmidt, L Zheng, T Peer, V Wagner, M Grube
Biodiversity and Conservation 23 (7), 1735-1755, 2014
642014
Disentangling the mechanisms shaping the surface ocean microbiota
R Logares, IM Deutschmann, PC Junger, CR Giner, AK Krabberød, ...
Microbiome 8 (1), 1-17, 2020
47*2020
MAPseq: highly efficient k-mer search with confidence estimates, for rRNA sequence analysis
JF Matias Rodrigues, TSB Schmidt, J Tackmann, C von Mering
Bioinformatics 33 (23), 3808-3810, 2017
442017
Grasp detection from human ECoG during natural reach-to-grasp movements
T Pistohl, TSB Schmidt, T Ball, A Schulze-Bonhage, A Aertsen, C Mehring
PloS one 8 (1), e54658, 2013
412013
A family of interaction-adjusted indices of community similarity
TSB Schmidt, JFM Rodrigues, C Von Mering
The ISME journal 11 (3), 791-807, 2017
242017
Disentangling the impact of environmental and phylogenetic constraints on prokaryotic within-species diversity
OM Maistrenko, DR Mende, M Luetge, F Hildebrand, TSB Schmidt, SS Li, ...
The ISME journal 14 (5), 1247-1259, 2020
192020
Effects of oral antibiotics and isotretinoin on the murine gut microbiota
E Becker, TSB Schmidt, S Bengs, L Poveda, L Opitz, K Atrott, C Stanzel, ...
International journal of antimicrobial agents 50 (3), 342-351, 2017
182017
proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes
DR Mende, I Letunic, OM Maistrenko, TSB Schmidt, A Milanese, L Paoli, ...
Nucleic acids research 48 (D1), D621-D625, 2020
142020
Preventive Trichuris suis ova (TSO) treatment protects immunocompetent rabbits from DSS colitis but may be detrimental under conditions of immunosuppression
I Leonardi, A Gerstgrasser, TSB Schmidt, F Nicholls, B Tewes, ...
Scientific reports 7 (1), 1-15, 2017
122017
Protein tyrosine phosphatase non-receptor type 22 modulates colitis in a microbiota-dependent manner
MR Spalinger, TSB Schmidt, M Schwarzfischer, L Hering, K Atrott, S Lang, ...
The Journal of clinical investigation 129 (6), 2527-2541, 2019
102019
Ecologically informed microbial biomarkers and accurate classification of mixed and unmixed samples in an extensive cross-study of human body sites
J Tackmann, N Arora, TSB Schmidt, JFM Rodrigues, C von Mering
Microbiome 6 (1), 1-16, 2018
72018
treeclimbR pinpoints the data-dependent resolution of hierarchical hypotheses
R Huang, C Soneson, PL Germain, TSB Schmidt, C Von Mering, ...
Genome biology 22 (1), 1-21, 2021
5*2021
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Articles 1–20