Motoki Shiga
Motoki Shiga
Associate Professor, Gifu University, Japan
Verified email at gifu-u.ac.jp - Homepage
Title
Cited by
Cited by
Year
A spectral clustering approach to optimally combining numericalvectors with a modular network
M Shiga, I Takigawa, H Mamitsuka
Proceedings of the 13th ACM SIGKDD international conference on Knowledge …, 2007
1172007
Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open …
J Guinney, T Wang, TD Laajala, KK Winner, JC Bare, EC Neto, SA Khan, ...
The Lancet Oncology 18 (1), 132-142, 2017
1122017
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ...
Nature communications 10 (1), 1-17, 2019
1002019
Machine-learning-based selective sampling procedure for identifying the low-energy region in a potential energy surface: A case study on proton conduction in oxides
K Toyoura, D Hirano, A Seko, M Shiga, A Kuwabara, M Karasuyama, ...
Physical Review B 93 (5), 054112, 2016
552016
Sparse modeling of EELS and EDX spectral imaging data by nonnegative matrix factorization
M Shiga, K Tatsumi, S Muto, K Tsuda, Y Yamamoto, T Mori, T Tanji
Ultramicroscopy 170, 43-59, 2016
532016
Mining significant tree patterns in carbohydrate sugar chains
K Hashimoto, I Takigawa, M Shiga, M Kanehisa, H Mamitsuka
Bioinformatics 24 (16), i167-i173, 2008
522008
Annotating gene function by combining expression data with a modular gene network
M Shiga, I Takigawa, H Mamitsuka
Bioinformatics 23 (13), i468-i478, 2007
422007
Exploring a potential energy surface by machine learning for characterizing atomic transport
K Kanamori, K Toyoura, J Honda, K Hattori, A Seko, M Karasuyama, ...
Physical Review B 97 (12), 125124, 2018
262018
Efficiently finding genome-wide three-way gene interactions from transcript-and genotype-data
M Kayano, I Takigawa, M Shiga, K Tsuda, H Mamitsuka
Bioinformatics 25 (21), 2735-2743, 2009
242009
Genome-wide integration on transcription factors, histone acetylation and gene expression reveals genes co-regulated by histone modification patterns
Y Natsume-Kitatani, M Shiga, H Mamitsuka
PloS one 6 (7), e22281, 2011
222011
Efficient semi-supervised learning on locally informative multiple graphs
M Shiga, H Mamitsuka
Pattern Recognition 45 (3), 1035-1049, 2012
202012
Understanding diffraction patterns of glassy, liquid and amorphous materials via persistent homology analyses
Y Onodera, S Kohara, S Tahara, A Masuno, H Inoue, M Shiga, A Hirata, ...
Journal of the Ceramic Society of Japan 127 (12), 853-863, 2019
182019
Upper bound for variational free energy of Bayesian networks
K Watanabe, M Shiga, S Watanabe
Machine Learning 75 (2), 199-215, 2009
182009
ROS-DET: robust detector of switching mechanisms in gene expression
M Kayano, I Takigawa, M Shiga, K Tsuda, H Mamitsuka
Nucleic acids research 39 (11), e74-e74, 2011
172011
Multi-fidelity bayesian optimization with max-value entropy search
S Takeno, H Fukuoka, Y Tsukada, T Koyama, M Shiga, I Takeuchi, ...
arXiv preprint arXiv:1901.08275, 2019
162019
A variational bayesian framework for clustering with multiple graphs
M Shiga, H Mamitsuka
IEEE Transactions on Knowledge and Data Engineering 24 (4), 577-590, 2010
162010
Detecting Differentially Coexpressed Genes from Labeled Expression Data: A Brief Review
M Kayano, M Shiga, H Mamitsuka
IEEE/ACM Transactions on Computational Biology and Bioinformatics 11 (1 …, 2014
152014
Direct conditional probability density estimation with sparse feature selection
M Shiga, V Tangkaratt, M Sugiyama
Machine Learning 100 (2), 161-182, 2015
132015
Non-negative Matrix Factorization with Auxiliary Information on Overlapping Groups
M Shiga, H Mamitsuka
IEEE Transactions on Knowledge and Data Engineering, doi:10.1109/TKDE.2014 …, 2015
132015
Annotating Gene Functions by Spectral Clustering for Combining Gene Expressions and Sequences
L Li, M Shiga, W Ching, H Mamitsuka
Genome Informatics 22, 95-120, 2010
13*2010
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Articles 1–20