| On the calculation of entropy from covariance matrices of the atomic fluctuations I Andricioaei, M Karplus The Journal of Chemical Physics 115 (14), 6289-6292, 2001 | 606 | 2001 |
| Transient Hoogsteen base pairs in canonical duplex DNA EN Nikolova, E Kim, AA Wise, PJ O’Brien, I Andricioaei, HM Al-Hashimi Nature 470 (7335), 498-502, 2011 | 382 | 2011 |
| Discovery of selective bioactive small molecules by targeting an RNA dynamic ensemble AC Stelzer, AT Frank, JD Kratz, MD Swanson, MJ Gonzalez-Hernandez, ... Nature chemical biology 7 (8), 553-559, 2011 | 298 | 2011 |
| Membrane protein structure, function, and dynamics: a perspective from experiments and theory Z Cournia, TW Allen, I Andricioaei, B Antonny, D Baum, G Brannigan, ... The Journal of membrane biology 248, 611-640, 2015 | 219 | 2015 |
| Generalized simulated annealing algorithms using Tsallis statistics: Application to conformational optimization of a tetrapeptide I Andricioaei, JE Straub Physical Review E 53 (4), R3055, 1996 | 207 | 1996 |
| Constructing RNA dynamical ensembles by combining MD and motionally decoupled NMR RDCs: new insights into RNA dynamics and adaptive ligand recognition AT Frank, AC Stelzer, HM Al-Hashimi, I Andricioaei Nucleic acids research 37 (11), 3670-3679, 2009 | 144 | 2009 |
| On Monte Carlo and molecular dynamics methods inspired by Tsallis statistics: Methodology, optimization, and application to atomic clusters I Andricioaei, JE Straub The Journal of chemical physics 107 (21), 9117-9124, 1997 | 142 | 1997 |
| Conversion between three conformational states of integrin I domains with a C-terminal pull spring studied with molecular dynamics M Jin, I Andricioaei, TA Springer Structure 12 (12), 2137-2147, 2004 | 131 | 2004 |
| Slowing down single-molecule trafficking through a protein nanopore reveals intermediates for peptide translocation L Mereuta, M Roy, A Asandei, JK Lee, Y Park, I Andricioaei, T Luchian Scientific reports 4 (1), 3885, 2014 | 121 | 2014 |
| m1A and m1G disrupt A-RNA structure through the intrinsic instability of Hoogsteen base pairs H Zhou, IJ Kimsey, EN Nikolova, B Sathyamoorthy, G Grazioli, J McSally, ... Nature structural & molecular biology 23 (9), 803-810, 2016 | 119 | 2016 |
| A general method for constructing atomic-resolution RNA ensembles using NMR residual dipolar couplings: the basis for interhelical motions revealed L Salmon, G Bascom, I Andricioaei, HM Al-Hashimi Journal of the American Chemical Society 135 (14), 5457-5466, 2013 | 116 | 2013 |
| Poly (amidoamine) dendrimers on lipid bilayers II: Effects of bilayer phase and dendrimer termination CV Kelly, PR Leroueil, BG Orr, MM Banaszak Holl, I Andricioaei The Journal of Physical Chemistry B 112 (31), 9346-9353, 2008 | 112 | 2008 |
| Smart darting monte carlo I Andricioaei, JE Straub, AF Voter The Journal of Chemical Physics 114 (16), 6994-7000, 2001 | 111 | 2001 |
| Dynamic distance disorder in proteins is caused by trapping G Luo, I Andricioaei, XS Xie, M Karplus The Journal of Physical Chemistry B 110 (19), 9363-9367, 2006 | 95 | 2006 |
| Characterizing complex dynamics in the transactivation response element apical loop and motional correlations with the bulge by NMR, molecular dynamics, and mutagenesis EA Dethoff, AL Hansen, C Musselman, ED Watt, I Andricioaei, ... Biophysical journal 95 (8), 3906-3915, 2008 | 87 | 2008 |
| Poly (amidoamine) dendrimers on lipid bilayers I: Free energy and conformation of binding CV Kelly, PR Leroueil, EK Nett, JM Wereszczynski, JR Baker Jr, BG Orr, ... The Journal of Physical Chemistry B 112 (31), 9337-9345, 2008 | 86 | 2008 |
| Size, motion, and function of the SecY translocon revealed by molecular dynamics simulations with virtual probes P Tian, I Andricioaei Biophysical journal 90 (8), 2718-2730, 2006 | 84 | 2006 |
| Distant residues modulate conformational opening in SARS-CoV-2 spike protein D Ray, L Le, I Andricioaei Proceedings of the National Academy of Sciences 118 (43), e2100943118, 2021 | 77 | 2021 |
| Impact of static and dynamic A-form heterogeneity on the determination of RNA global structural dynamics using NMR residual dipolar couplings C Musselman, SW Pitt, K Gulati, LL Foster, I Andricioaei, HM Al-Hashimi Journal of biomolecular NMR 36, 235-249, 2006 | 69 | 2006 |
| Repetitive pulling catalyzes co-translocational unfolding of barnase during import through a mitochondrial pore P Tian, I Andricioaei Journal of molecular biology 350 (5), 1017-1034, 2005 | 65 | 2005 |
