Lieven Clement
Lieven Clement
Associate Professor in Statistical Genomics, Ghent University
Verified email at - Homepage
Cited by
Cited by
Initial community evenness favours functionality under selective stress
L Wittebolle, M Marzorati, L Clement, A Balloi, D Daffonchio, K Heylen, ...
Nature 458 (7238), 623-626, 2009
Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis
S Swinnen, K Schaerlaekens, T Pais, J Claesen, G Hubmann, Y Yang, ...
Genome Research, 2012
Trajectory-based differential expression analysis for single-cell sequencing data
K Van den Berge, H Roux de Bézieux, K Street, W Saelens, R Cannoodt, ...
Nature communications 11 (1), 1-13, 2020
Leaf responses to mild drought stress in natural variants of Arabidopsis
P Clauw, F Coppens, K De Beuf, S Dhondt, T Van Daele, K Maleux, ...
Plant physiology 167 (3), 800-816, 2015
Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications
K Van den Berge, F Perraudeau, C Soneson, MI Love, D Risso, JP Vert, ...
Genome biology 19 (1), 1-17, 2018
Measuring the biodiversity of microbial communities by flow cytometry
R Props, P Monsieurs, M Mysara, L Clement, N Boon
Methods in Ecology and Evolution 7 (11), 1376-1385, 2016
Flow cytometry for fast microbial community fingerprinting
K De Roy, L Clement, O Thas, Y Wang, N Boon
Water research, 2011
Probabilistic index models
O Thas, JD Neve, L Clement, JP Ottoy
Journal of the Royal Statistical Society: Series B (Statistical Methodology …, 2012
RNA sequencing data: Hitchhiker's guide to expression analysis
K Van den Berge, KM Hembach, C Soneson, S Tiberi, L Clement, MI Love, ...
Annual Review of Biomedical Data Science 2 (1), 139-173, 2019
QTL analysis of high thermotolerance with superior and downgraded parental yeast strains reveals new minor QTLs and converges on novel causative alleles involved in RNA processing
Y Yang, MR Foulquié-Moreno, L Clement, E Erdei, A Tanghe, ...
PLoS genetics 9 (8), e1003693, 2013
Faecal proteomics: A tool to investigate dysbiosis and inflammation in patients with cystic fibrosis
G Debyser, B Mesuere, L Clement, J Van de Weygaert, P Van Hecke, ...
Journal of Cystic Fibrosis 15 (2), 242-250, 2016
stageR: a general stage-wise method for controlling the gene-level false discovery rate in differential expression and differential transcript usage
K Van den Berge, C Soneson, MD Robinson, L Clement
Genome biology 18 (1), 1-14, 2017
A sex-inducing pheromone triggers cell cycle arrest and mate attraction in the diatom Seminavis robusta
S Moeys, J Frenkel, C Lembke, JTF Gillard, V Devos, K Van den Berge, ...
Scientific reports 6 (1), 1-13, 2016
Peptide-level robust ridge regression improves estimation, sensitivity, and specificity in data-dependent quantitative label-free shotgun proteomics
LJE Goeminne, K Gevaert, L Clement
Molecular & Cellular Proteomics 15 (2), 657-668, 2016
VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering
BMP Verbist, K Thys, J Reumers, Y Wetzels, K Van der Borght, W Talloen, ...
Bioinformatics 31 (1), 94-101, 2015
moFF: a robust and automated approach to extract peptide ion intensities
A Argentini, LJE Goeminne, K Verheggen, N Hulstaert, A Staes, ...
Nature methods 13 (12), 964-966, 2016
Experimental design and data-analysis in label-free quantitative LC/MS proteomics: A tutorial with MSqRob
LJE Goeminne, K Gevaert, L Clement
Journal of proteomics 171, 23-36, 2018
Practical tools to implement massive parallel pyrosequencing of PCR products in next generation molecular diagnostics
K De Leeneer, J De Schrijver, L Clement, M Baetens, S Lefever, ...
PLoS One 6 (9), e25531, 2011
Impact of variance components on reliability of absolute quantification using digital PCR
BKM Jacobs, E Goetghebeur, L Clement
BMC bioinformatics 15 (1), 1-13, 2014
Summarization vs peptide-based models in label-free quantitative proteomics: performance, pitfalls, and data analysis guidelines
LJE Goeminne, A Argentini, L Martens, L Clement
Journal of proteome research 14 (6), 2457-2465, 2015
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