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Valeria Velásquez-Zapata
Valeria Velásquez-Zapata
PhD Bioinformatics and Computational Biology. Greenlight Bio
Verified email at greenlightbio.com - Homepage
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Year
The tuatara genome reveals ancient features of amniote evolution
NJ Gemmell, K Rutherford, S Prost, M Tollis, D Winter, JR Macey, ...
Nature 584 (7821), 403-409, 2020
1332020
Functional classification of DNA variants by hybrid minigenes: Identification of 30 spliceogenic variants of BRCA2 exons 17 and 18
E Fraile-Bethencourt, B Díez-Gómez, V Velásquez-Zapata, A Acedo, ...
PLoS genetics 13 (3), e1006691, 2017
622017
Inheritance of Rootstock Effects in Avocado (Persea americana Mill.) cv. Hass
PH Reyes-Herrera, L Muñoz-Baena, V Velásquez-Zapata, L Patiño, ...
Frontiers in plant science 11, 555071, 2020
352020
Next-generation yeast-two-hybrid analysis with Y2H-SCORES identifies novel interactors of the MLA immune receptor
V Velásquez-Zapata, JM Elmore, S Banerjee, KS Dorman, RP Wise
PLoS Computational Biology 17 (4), e1008890, 2021
192021
NGPINT: a next-generation protein–protein interaction software
S Banerjee, V Velásquez-Zapata, G Fuerst, JM Elmore, RP Wise
Briefings in bioinformatics 22 (4), bbaa351, 2021
152021
Disruption of barley immunity to powdery mildew by an in-frame Lys-Leu deletion in the essential protein SGT1
AVE Chapman, M Hunt, P Surana, V Velásquez-Zapata, W Xu, G Fuerst, ...
Genetics 217 (2), iyaa026, 2021
132021
The tuatara genome: insights into vertebrate evolution from the sole survivor of an ancient reptilian order
NJ Gemmell, K Rutherford, S Prost, M Tollis, D Winter, JR Macey, ...
bioRxiv, 867069, 2019
72019
Y2H-SCORES: A statistical framework to infer protein-protein interactions from next-generation yeast-two-hybrid sequence data
V Velásquez-Zapata, JM Elmore, S Banerjee, KS Dorman, RP Wise
bioRxiv, 2020.09. 08.288365, 2020
52020
Next-generation yeast two-hybrid screening to discover protein–protein interactions
JM Elmore, V Velásquez-Zapata, RP Wise
Protein-Protein Interactions: Methods and Protocols, 205-222, 2023
42023
Detection of molecular targets on the phosphatidylinositol signaling pathway of Leishmania spp. through bioinformatics tools and mathematical modeling
V Velasquez-Zapata, R Ochoa, C Muskus
Biomédica 35 (2), 235-246, 2015
42015
An interolog-based barley interactome as an integration framework for immune signaling
V Velásquez-Zapata, JM Elmore, G Fuerst, RP Wise
Genetics 221 (2), iyac056, 2022
32022
Bioinformatic analysis of yeast two-hybrid next-generation interaction screen data
V Velásquez-Zapata, JM Elmore, RP Wise
Protein-Protein Interactions: Methods and Protocols, 223-239, 2023
22023
Transcriptome-based host epistasis and pathogen co-expression in barley-powdery mildew interactions
V Velásquez-Zapata, SD Smith, P Surana, AVE Chapman, RP Wise
bioRxiv, 2023.09. 18.558274, 2023
22023
Powdery mildew effectors AVRA1 and BEC1016 target the ER J-domain protein HvERdj3B required for immunity in barley
Z Li, V Velásquez-Zapata, JM Elmore, X Li, W Xie, S Deb, X Tian, ...
bioRxiv, 2022.04. 27.489729, 2022
22022
Assessment of genotyping markers in the molecular characterization of a population of clinical isolates of Fusarium in Colombia
V Velásquez-Zapata, K Palacio-Rúa, LE Cano, A Gaviria-Rivera
Biomédica 42 (1), 18-30, 2022
12022
Detección de blancos moleculares en la ruta de señalización del fosfatidil-inositol en Leishmania spp. mediante herramientas bioinformáticas y de modelado matemático
R Ochoa, C Muskus
Biomédica 35 (2), 235-246, 2015
12015
Check Chapter 19 updates for
JPM Viala, E Bouveret
Bacterial Secretion Systems: Methods and Protocols 2715, 285, 2023
2023
Multi-layered characterization of the barley interactome links MLA immune receptor signaling with defense gene expression
V Velasquez-Zapata, M Elmore, G Fuerst, RP Wise
MOLECULAR PLANT-MICROBE INTERACTIONS 34 (7), 2021
2021
Modeling of gene and protein networks in the context of plant immunity
VV Zapata
Iowa State University, 2021
2021
Next-generation interaction screening for discovery of host targets of fungal effectors
JM Elmore, V Velasquez-Zapata, S Banerjee, P Surana, G Fuerst, R Wise
2019 IS-MPMI XVIII Congress, 2019
2019
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