| Analysis of alternative cleavage and polyadenylation by 3′ region extraction and deep sequencing M Hoque, Z Ji, D Zheng, W Luo, W Li, B You, JY Park, G Yehia, B Tian Nature methods 10 (2), 133-139, 2013 | 466 | 2013 |
| Ago–TNRC6 triggers microRNA-mediated decay by promoting two deadenylation steps CYA Chen, D Zheng, Z Xia, AB Shyu Nature structural & molecular biology 16 (11), 1160-1166, 2009 | 271 | 2009 |
| Deadenylation is prerequisite for P-body formation and mRNA decay in mammalian cells D Zheng, N Ezzeddine, CYA Chen, W Zhu, X He, AB Shyu The Journal of cell biology 182 (1), 89-101, 2008 | 269 | 2008 |
| Systematic profiling of poly (A)+ transcripts modulated by core 3’end processing and splicing factors reveals regulatory rules of alternative cleavage and polyadenylation W Li, B You, M Hoque, D Zheng, W Luo, Z Ji, JY Park, SI Gunderson, ... PLoS genetics 11 (4), e1005166, 2015 | 246 | 2015 |
| Human TOB, an antiproliferative transcription factor, is a poly (A)-binding protein-dependent positive regulator of cytoplasmic mRNA deadenylation N Ezzeddine, TC Chang, W Zhu, A Yamashita, CYA Chen, Z Zhong, ... Molecular and cellular biology 27 (22), 7791-7801, 2007 | 193 | 2007 |
| PolyA_DB 3 catalogs cleavage and polyadenylation sites identified by deep sequencing in multiple genomes R Wang, R Nambiar, D Zheng, B Tian Nucleic acids research 46 (D1), D315-D319, 2018 | 171 | 2018 |
| Cellular stress alters 3′ UTR landscape through alternative polyadenylation and isoform-specific degradation D Zheng, R Wang, Q Ding, T Wang, B Xie, L Wei, Z Zhong, B Tian Nature communications 9 (1), 1-14, 2018 | 132 | 2018 |
| Alternative cleavage and polyadenylation in spermatogenesis connects chromatin regulation with post-transcriptional control W Li, JY Park, D Zheng, M Hoque, G Yehia, B Tian BMC biology 14, 1-17, 2016 | 92 | 2016 |
| A compendium of conserved cleavage and polyadenylation events in mammalian genes R Wang, D Zheng, G Yehia, B Tian Genome research 28 (10), 1427-1441, 2018 | 90 | 2018 |
| Comparative analysis of mRNA isoform expression in cardiac hypertrophy and development reveals multiple post-transcriptional regulatory modules JY Park, W Li, D Zheng, P Zhai, Y Zhao, T Matsuda, SF Vatner, ... PloS one 6 (7), e22391, 2011 | 82 | 2011 |
| Regulation of intronic polyadenylation by PCF11 impacts mRNA expression of long genes R Wang, D Zheng, L Wei, Q Ding, B Tian Cell reports 26 (10), 2766-2778. e6, 2019 | 76 | 2019 |
| 3′ READS+, a sensitive and accurate method for 3′ end sequencing of polyadenylated RNA D Zheng, X Liu, B Tian Rna 22 (10), 1631-1639, 2016 | 75 | 2016 |
| ALS/FTD-associated protein FUS induces mitochondrial dysfunction by preferentially sequestering respiratory chain complex mRNAs YL Tsai, TH Coady, L Lu, D Zheng, I Alland, B Tian, NA Shneider, ... Genes & Development 34 (11-12), 785-805, 2020 | 55 | 2020 |
| Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster X Liu, J Freitas, D Zheng, MS Oliveira, M Hoque, T Martins, T Henriques, ... Rna 23 (12), 1807-1816, 2017 | 55 | 2017 |
| Unraveling regulation and new components of human P-bodies through a protein interaction framework and experimental validation D Zheng, CYA Chen, AB Shyu Rna 17 (9), 1619-1634, 2011 | 52 | 2011 |
| RNA-binding proteins in regulation of alternative cleavage and polyadenylation D Zheng, B Tian Systems Biology of RNA Binding Proteins, 97-127, 2014 | 51 | 2014 |
| Novel mouse models of oculopharyngeal muscular dystrophy (OPMD) reveal early onset mitochondrial defects and suggest loss of PABPN1 may contribute to pathology KE Vest, BL Phillips, A Banerjee, LH Apponi, EB Dammer, W Xu, D Zheng, ... Human molecular genetics 26 (17), 3235-3252, 2017 | 49 | 2017 |
| Activity-dependent regulation of alternative cleavage and polyadenylation during hippocampal long-term potentiation MM Fontes, A Guvenek, R Kawaguchi, D Zheng, A Huang, VM Ho, ... Scientific reports 7 (1), 17377, 2017 | 45 | 2017 |
| Widespread transcript shortening through alternative polyadenylation in secretory cell differentiation LC Cheng, D Zheng, E Baljinnyam, F Sun, K Ogami, PL Yeung, M Hoque, ... Nature communications 11 (1), 3182, 2020 | 43 | 2020 |
| ALYREF links 3′‐end processing to nuclear export of non‐polyadenylated mRNA s J Fan, K Wang, X Du, J Wang, S Chen, Y Wang, M Shi, L Zhang, X Wu, ... The EMBO journal 38 (9), e99910, 2019 | 36 | 2019 |
