Follow
Jiali Zhuang
Title
Cited by
Cited by
Year
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
137742012
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium Overall coordination (data analysis coordination ...
Nature 489 (7414), 57-74, 2012
30442012
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ...
Genome research 22 (9), 1798-1812, 2012
10442012
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ...
Genome research 22 (9), 1798-1812, 2012
10442012
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ...
Genome research 22 (9), 1798-1812, 2012
10432012
Factorbook. org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium
J Wang, J Zhuang, S Iyer, XY Lin, MC Greven, BH Kim, J Moore, ...
Nucleic acids research 41 (D1), D171-D176, 2012
4302012
TEMP: a computational method for analyzing transposable element polymorphism in populations
J Zhuang, J Wang, W Theurkauf, Z Weng
Nucleic acids research 42 (11), 6826-6838, 2014
1302014
PGBD5 promotes site-specific oncogenic mutations in human tumors
AG Henssen, R Koche, J Zhuang, E Jiang, C Reed, A Eisenberg, E Still, ...
Nature genetics 49 (7), 1005-1014, 2017
862017
Non-invasive characterization of human bone marrow stimulation and reconstitution by cell-free messenger RNA sequencing
A Ibarra, J Zhuang, Y Zhao, NS Salathia, V Huang, AD Acosta, J Aballi, ...
Nature communications 11 (1), 400, 2020
492020
Noninvasive characterization of Alzheimer’s disease by circulating, cell-free messenger RNA next-generation sequencing
S Toden, J Zhuang, AD Acosta, AP Karns, NS Salathia, JB Brewer, ...
Science advances 6 (50), eabb1654, 2020
432020
Local sequence assembly reveals a high-resolution profile of somatic structural variations in 97 cancer genomes
J Zhuang, Z Weng
Nucleic acids research 43 (17), 8146-8156, 2015
242015
TGF‐β1 enhances Kv2. 1 potassium channel protein expression and promotes maturation of cerebellar granule neurons
JL Zhuang, CY Wang, MH Zhou, KZ Duan, YA Mei
Journal of cellular physiology 227 (1), 297-307, 2012
232012
Noninvasive stratification of nonalcoholic fatty liver disease by whole transcriptome cell-free mRNA characterization
N Chalasani, S Toden, JJ Sninsky, RP Rava, JV Braun, S Gawrieh, ...
American Journal of Physiology-Gastrointestinal and Liver Physiology 320 (4 …, 2021
172021
Forward genetic screen of human transposase genomic rearrangements
AG Henssen, E Jiang, J Zhuang, L Pinello, ND Socci, R Koche, M Gonen, ...
BMC genomics 17, 1-9, 2016
152016
Genome-wide mapping of the binding sites of 119 human transcription factors
J Wang, J Zhuang, S Iyer, X Lin, T Whitfield, M Greven, SF Aldred, ...
Submitted, NCP010, 2011
42011
Survey of extracellular communication of systemic and organ-specific inflammatory responses through cell free messenger RNA profiling in mice
J Zhuang, A Ibarra, A Acosta, AP Karns, J Aballi, M Nerenberg, JJ Sninsky, ...
Ebiomedicine 83, 2022
32022
Circulating cell-free messenger RNA secretome characterization of primary sclerosing cholangitis
N Chalasani, R Vuppalanchi, C Lammert, S Gawrieh, JV Braun, J Zhuang, ...
Hepatology Communications 7 (6), e0140, 2023
12023
Cell-free rna library preparations
N Salathia, M Nerenberg, A Ibarra, J Zhuang
US Patent App. 17/243,452, 2022
12022
Factorbook Motif Pipeline: A de novo motif discovery and filtering web server for ChIP-seq peaks
BH Kim, J Zhuang, J Wang, Z Weng
bioRxiv, 033670, 2015
12015
Systems and methods of detecting a risk of alzheimer's disease using a circulating-free mrna profiling assay
M Nerenberg, A Ibarra, J Zhuang, A Acosta
US Patent App. 17/932,244, 2023
2023
The system can't perform the operation now. Try again later.
Articles 1–20