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Aimee R Taylor
Aimee R Taylor
Verified email at pasteur.fr
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Cited by
Cited by
Year
Using observational data to quantify bias of traveller-derived COVID-19 prevalence estimates in Wuhan, China
R Niehus, PM De Salazar, AR Taylor, M Lipsitch
The Lancet Infectious Diseases, 2020
165*2020
Identifying locations with possible undetected imported severe acute respiratory syndrome coronavirus 2 cases by using importation predictions
PM De Salazar, R Niehus, A Taylor, COF Buckee, M Lipsitch
Emerging infectious diseases 26 (7), 1465, 2020
128*2020
hmmIBD: software to infer pairwise identity by descent between haploid genotypes
SF Schaffner, AR Taylor, W Wong, DF Wirth, DE Neafsey
Malaria journal 17 (1), 1-4, 2018
672018
Quantifying connectivity between local Plasmodium falciparum malaria parasite populations using identity by descent
AR Taylor, SF Schaffner, GC Cerqueira, SC Nkhoma, TJC Anderson, ...
PLoS genetics 13 (10), e1007065, 2017
672017
Mapping malaria by combining parasite genomic and epidemiologic data
A Wesolowski, AR Taylor, HH Chang, R Verity, S Tessema, JA Bailey, ...
BMC medicine 16 (1), 1-8, 2018
612018
Resolving the cause of recurrent Plasmodium vivax malaria probabilistically
AR Taylor, JA Watson, CS Chu, K Puaprasert, J Duanguppama, NPJ Day, ...
Nature Communications 10 (1), 1-11, 2019
532019
Changing antimalarial drug resistance patterns identified by surveillance at three sites in Uganda
P Tumwebaze, S Tukwasibwe, A Taylor, M Conrad, E Ruhamyankaka, ...
The Journal of infectious diseases 215 (4), 631-635, 2016
412016
Artemether-lumefantrine and dihydroartemisinin-piperaquine exert inverse selective pressure on Plasmodium falciparum drug sensitivity-associated haplotypes in Uganda
AR Taylor, JA Flegg, CC Holmes, PJ Guérin, CH Sibley, MD Conrad, ...
Open forum infectious diseases 4 (1), 2017
352017
Estimating relatedness between malaria parasites
AR Taylor, PE Jacob, DE Neafsey, CO Buckee
Genetics 212 (4), 1337-1351, 2019
312019
Advances and opportunities in malaria population genomics
DE Neafsey, AR Taylor, BL MacInnis
Nature Reviews Genetics 22 (8), 502-517, 2021
272021
Estimation of malaria haplotype and genotype frequencies: a statistical approach to overcome the challenge associated with multiclonal infections
AR Taylor, JA Flegg, SL Nsobya, A Yeka, MR Kamya, PJ Rosenthal, ...
Malaria journal 13 (1), 1-11, 2014
262014
A molecular barcode to inform the geographical origin and transmission dynamics of Plasmodium vivax malaria
E Diez Benavente, M Campos, J Phelan, D Nolder, JG Dombrowski, ...
PLoS genetics 16 (2), e1008576, 2020
142020
Identity-by-descent with uncertainty characterises connectivity of Plasmodium falciparum populations on the Colombian-Pacific coast
AR Taylor, DF Echeverry, TJC Anderson, DE Neafsey, CO Buckee
PLoS genetics 16 (11), e1009101, 2020
10*2020
A decision-theoretic approach to the evaluation of machine learning algorithms in computational drug discovery
OP Watson, I Cortes-Ciriano, AR Taylor, JA Watson
Bioinformatics, 2019
72019
Tafenoquine versus Primaquine to Prevent Relapse of Plasmodium vivax Malaria.
JC Quinn, S McCarthy
The New England journal of medicine 380 (19), 1875-1875, 2019
52019
Evaluating the reliability of mobility metrics from aggregated mobile phone data as proxies for SARS-CoV-2 transmission in the USA: a population-based study
N Kishore, AR Taylor, PE Jacob, N Vembar, T Cohen, CO Buckee, ...
The Lancet Digital Health 4 (1), e27-e36, 2022
42022
Design and implementation of multiplexed amplicon sequencing panels to serve genomic epidemiology of infectious disease: a malaria case study
E LaVerriere, P Schwabl, M Carrasquilla, AR Taylor, ZM Johnson, ...
Molecular Ecology Resources, 2022
32022
A cautionary note on the use of unsupervised machine learning algorithms to characterise malaria parasite population structure from genetic distance matrices
JA Watson, AR Taylor, EA Ashley, A Dondorp, CO Buckee, NJ White, ...
PLoS genetics 16 (10), e1009037, 2020
22020
The relationship between human mobility measures and SAR-Cov-2 transmission varies by epidemic phase and urbanicity: results from the United States
N Kishore, AR Taylor, PE Jacob, N Vembar, T Cohen, CO Buckee, ...
medRxiv, 2021
12021
Pixelate to communicate: visualising uncertainty in maps of disease risk and other spatial continua
AR Taylor, JA Watson, CO Buckee
arXiv preprint arXiv:2005.11993, 2020
2020
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Articles 1–20