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Aimee R Taylor
Aimee R Taylor
Verified email at pasteur.fr
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Year
Using observational data to quantify bias of traveller-derived COVID-19 prevalence estimates in Wuhan, China
R Niehus, PM De Salazar, AR Taylor, M Lipsitch
The Lancet Infectious Diseases, 2020
191*2020
Identifying locations with possible undetected imported severe acute respiratory syndrome coronavirus 2 cases by using importation predictions
PM De Salazar, R Niehus, A Taylor, COF Buckee, M Lipsitch
Emerging infectious diseases 26 (7), 1465, 2020
137*2020
hmmIBD: software to infer pairwise identity by descent between haploid genotypes
SF Schaffner, AR Taylor, W Wong, DF Wirth, DE Neafsey
Malaria journal 17, 1-4, 2018
1012018
Quantifying connectivity between local Plasmodium falciparum malaria parasite populations using identity by descent
AR Taylor, SF Schaffner, GC Cerqueira, SC Nkhoma, TJC Anderson, ...
PLoS genetics 13 (10), e1007065, 2017
932017
Resolving the cause of recurrent Plasmodium vivax malaria probabilistically
AR Taylor, JA Watson, CS Chu, K Puaprasert, J Duanguppama, NPJ Day, ...
Nature communications 10 (1), 5595, 2019
832019
Mapping malaria by combining parasite genomic and epidemiologic data
A Wesolowski, AR Taylor, HH Chang, R Verity, S Tessema, JA Bailey, ...
BMC medicine 16 (1), 1-8, 2018
832018
Advances and opportunities in malaria population genomics
DE Neafsey, AR Taylor, BL MacInnis
Nature Reviews Genetics 22 (8), 502-517, 2021
732021
Changing antimalarial drug resistance patterns identified by surveillance at three sites in Uganda
P Tumwebaze, S Tukwasibwe, A Taylor, M Conrad, E Ruhamyankaka, ...
The Journal of infectious diseases 215 (4), 631-635, 2016
512016
Estimating relatedness between malaria parasites
AR Taylor, PE Jacob, DE Neafsey, CO Buckee
Genetics 212 (4), 1337-1351, 2019
502019
Artemether-Lumefantrine and Dihydroartemisinin-Piperaquine Exert Inverse Selective Pressure on Plasmodium Falciparum Drug Sensitivity-Associated …
AR Taylor, JA Flegg, CC Holmes, PJ Guérin, CH Sibley, MD Conrad, ...
Open Forum Infectious Diseases 4 (1), ofw229, 2017
362017
Estimation of malaria haplotype and genotype frequencies: a statistical approach to overcome the challenge associated with multiclonal infections
AR Taylor, JA Flegg, SL Nsobya, A Yeka, MR Kamya, PJ Rosenthal, ...
Malaria journal 13 (1), 1-11, 2014
292014
Evaluating the reliability of mobility metrics from aggregated mobile phone data as proxies for SARS-CoV-2 transmission in the USA: a population-based study
N Kishore, AR Taylor, PE Jacob, N Vembar, T Cohen, CO Buckee, ...
The Lancet Digital Health 4 (1), e27-e36, 2022
272022
A molecular barcode to inform the geographical origin and transmission dynamics of Plasmodium vivax malaria
E Diez Benavente, M Campos, J Phelan, D Nolder, JG Dombrowski, ...
PLoS genetics 16 (2), e1008576, 2020
272020
Design and implementation of multiplexed amplicon sequencing panels to serve genomic epidemiology of infectious disease: a malaria case study
E LaVerriere, P Schwabl, M Carrasquilla, AR Taylor, ZM Johnson, ...
Molecular ecology resources 22 (6), 2285-2303, 2022
232022
Identity-by-descent with uncertainty characterises connectivity of Plasmodium falciparum populations on the Colombian-Pacific coast
AR Taylor, DF Echeverry, TJC Anderson, DE Neafsey, CO Buckee
PLoS genetics 16 (11), e1009101, 2020
21*2020
A decision-theoretic approach to the evaluation of machine learning algorithms in computational drug discovery
OP Watson, I Cortes-Ciriano, AR Taylor, JA Watson
Bioinformatics, 2019
142019
Measurably recombining malaria parasites
F Camponovo, CO Buckee, AR Taylor
Trends in parasitology, 2023
82023
Tafenoquine versus Primaquine to Prevent Relapse of Plasmodium vivax Malaria.
JC Quinn, S McCarthy
The New England journal of medicine 380 (19), 1875-1875, 2019
62019
Lineage-informative microhaplotypes for spatio-temporal surveillance of Plasmodium vivax malaria parasites
SV Siegel, R Amato, H Trimarsanto, E Sutanto, M Kleinecke, K Murie, ...
medRxiv, 2023
32023
A cautionary note on the use of unsupervised machine learning algorithms to characterise malaria parasite population structure from genetic distance matrices
JA Watson, AR Taylor, EA Ashley, A Dondorp, CO Buckee, NJ White, ...
PLoS genetics 16 (10), e1009037, 2020
32020
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Articles 1–20