| Full-length transcriptome assembly from RNA-Seq data without a reference genome MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ... Nature biotechnology 29 (7), 644-652, 2011 | 17725 | 2011 |
| De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis BJ Haas, A Papanicolaou, M Yassour, M Grabherr, PD Blood, J Bowden, ... Nature protocols 8 (8), 1494-1512, 2013 | 8038 | 2013 |
| The treatment-naive microbiome in new-onset Crohn’s disease D Gevers, S Kugathasan, LA Denson, Y Vázquez-Baeza, W Van Treuren, ... Cell host & microbe 15 (3), 382-392, 2014 | 3438 | 2014 |
| Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ... Nature biotechnology 29 (7), 644, 2011 | 2216 | 2011 |
| Variation in microbiome LPS immunogenicity contributes to autoimmunity in humans T Vatanen, AD Kostic, E d’Hennezel, H Siljander, EA Franzosa, ... Cell 165 (4), 842-853, 2016 | 1352 | 2016 |
| Mother-to-infant microbial transmission from different body sites shapes the developing infant gut microbiome P Ferretti, E Pasolli, A Tett, F Asnicar, V Gorfer, S Fedi, F Armanini, ... Cell host & microbe 24 (1), 133-145. e5, 2018 | 1097 | 2018 |
| Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability M Yassour, T Vatanen, H Siljander, AM Hämäläinen, T Härkönen, ... Science translational medicine 8 (343), 343ra81-343ra81, 2016 | 983 | 2016 |
| Comprehensive comparative analysis of strand-specific RNA sequencing methods JZ Levin, M Yassour, X Adiconis, C Nusbaum, DA Thompson, N Friedman, ... Nature methods 7 (9), 709-715, 2010 | 919 | 2010 |
| A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients AB Hall, M Yassour, J Sauk, A Garner, X Jiang, T Arthur, GK Lagoudas, ... Genome medicine 9, 1-12, 2017 | 633 | 2017 |
| High-resolution view of the yeast meiotic program revealed by ribosome profiling GA Brar, M Yassour, N Friedman, A Regev, NT Ingolia, JS Weissman science 335 (6068), 552-557, 2012 | 595 | 2012 |
| Comparative functional genomics of the fission yeasts N Rhind, Z Chen, M Yassour, DA Thompson, BJ Haas, N Habib, ... Science 332 (6032), 930-936, 2011 | 547 | 2011 |
| High-resolution nucleosome mapping reveals transcription-dependent promoter packaging A Weiner, A Hughes, M Yassour, OJ Rando, N Friedman Genome research 20 (1), 90-100, 2010 | 434 | 2010 |
| Strain-level analysis of mother-to-child bacterial transmission during the first few months of life M Yassour, E Jason, LJ Hogstrom, TD Arthur, S Tripathi, H Siljander, ... Cell host & microbe 24 (1), 146-154. e4, 2018 | 401 | 2018 |
| Sub-clinical detection of gut microbial biomarkers of obesity and type 2 diabetes M Yassour, MY Lim, HS Yun, TL Tickle, J Sung, YM Song, K Lee, ... Genome medicine 8, 1-14, 2016 | 288 | 2016 |
| Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing M Yassour, T Kaplan, HB Fraser, JZ Levin, J Pfiffner, X Adiconis, ... Proceedings of the National Academy of Sciences 106 (9), 3264-3269, 2009 | 274 | 2009 |
| Large-scale implementation of pooled RNA extraction and RT-PCR for SARS-CoV-2 detection R Ben-Ami, A Klochendler, M Seidel, T Sido, O Gurel-Gurevich, ... Clinical Microbiology and Infection 26 (9), 1248-1253, 2020 | 230 | 2020 |
| Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life T Vatanen, DR Plichta, J Somani, PC Münch, TD Arthur, AB Hall, S Rudolf, ... Nature microbiology 4 (3), 470-479, 2019 | 209 | 2019 |
| Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies KM Kennedy, MC de Goffau, ME Perez-Muñoz, MC Arrieta, F Bäckhed, ... Nature 613 (7945), 639-649, 2023 | 205 | 2023 |
| The evolution, evolvability and engineering of gene regulatory DNA ED Vaishnav, CG de Boer, J Molinet, M Yassour, L Fan, X Adiconis, ... Nature 603 (7901), 455-463, 2022 | 167 | 2022 |
| Strand-specific RNA sequencing reveals extensive regulated long antisense transcripts that are conserved across yeast species M Yassour, J Pfiffner, JZ Levin, X Adiconis, A Gnirke, C Nusbaum, ... Genome biology 11, 1-14, 2010 | 159 | 2010 |
Nir FriedmanProfessor of Computer Science and Medicine, Hebrew UniversityVerified email at mail.huji.ac.il
