| Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites D Betel, A Koppal, P Agius, C Sander, C Leslie Genome biology 11, 1-14, 2010 | 1775 | 2010 |
| Evaluation of methods for modeling transcription factor sequence specificity MT Weirauch, A Cote, R Norel, M Annala, Y Zhao, TR Riley, ... Nature biotechnology 31 (2), 126-134, 2013 | 398 | 2013 |
| Immunogenic neoantigens derived from gene fusions stimulate T cell responses W Yang, KW Lee, RM Srivastava, F Kuo, C Krishna, D Chowell, ... Nature medicine 25 (5), 767-775, 2019 | 306 | 2019 |
| Sequence and chromatin determinants of cell-type–specific transcription factor binding A Arvey, P Agius, WS Noble, C Leslie Genome research 22 (9), 1723-1734, 2012 | 257 | 2012 |
| Identification of three rheumatoid arthritis disease subtypes by machine learning integration of synovial histologic features and RNA sequencing data DE Orange, P Agius, EF DiCarlo, N Robine, H Geiger, J Szymonifka, ... Arthritis & Rheumatology 70 (5), 690-701, 2018 | 169 | 2018 |
| Near universal detection of alterations in CTNNB1 and Wnt pathway regulators in desmoid‐type fibromatosis by whole‐exome sequencing and genomic analysis AM Crago, J Chmielecki, M Rosenberg, R O'Connor, C Byrne, FG Wilder, ... Genes, Chromosomes and Cancer 54 (10), 606-615, 2015 | 165 | 2015 |
| Mechanical strain enhances extracellular matrix-induced gene focusing and promotes osteogenic differentiation of human mesenchymal stem cells through an extracellular-related … DF Ward Jr, RM Salasznyk, RF Klees, J Backiel, P Agius, K Bennett, ... Stem cells and development 16 (3), 467-480, 2007 | 153 | 2007 |
| Inferring transcriptional and microRNA‐mediated regulatory programs in glioblastoma M Setty, K Helmy, AA Khan, J Silber, A Arvey, F Neezen, P Agius, JT Huse, ... Molecular systems biology 8 (1), 605, 2012 | 109 | 2012 |
| Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans WJ Chung, P Agius, JO Westholm, M Chen, K Okamura, N Robine, ... Genome research 21 (2), 286-300, 2011 | 91 | 2011 |
| High Resolution Models of Transcription Factor-DNA Affinities Improve In Vitro and In Vivo Binding Predictions P Agius, A Arvey, W Chang, WS Noble, C Leslie PLoS computational biology 6 (9), e1000916, 2010 | 72 | 2010 |
| Unexpected similarities between C9ORF72 and sporadic forms of ALS/FTD suggest a common disease mechanism EG Conlon, D Fagegaltier, P Agius, J Davis-Porada, J Gregory, I Hubbard, ... Elife 7, e37754, 2018 | 71 | 2018 |
| Integrin-α10 dependency identifies RAC and RICTOR as therapeutic targets in high-grade myxofibrosarcoma T Okada, AY Lee, LX Qin, N Agaram, T Mimae, Y Shen, R O'Connor, ... Cancer discovery 6 (10), 1148-1165, 2016 | 69 | 2016 |
| miR-193b–Regulated Signaling Networks Serve as Tumor Suppressors in Liposarcoma and Promote Adipogenesis in Adipose-Derived Stem Cells YZ Mazzu, Y Hu, RK Soni, KM Mojica, LX Qin, P Agius, ZM Waxman, ... Cancer research 77 (21), 5728-5740, 2017 | 51 | 2017 |
| Histologic and transcriptional evidence of subclinical synovial inflammation in patients with rheumatoid arthritis in clinical remission DE Orange, P Agius, EF DiCarlo, SZ Mirza, T Pannellini, J Szymonifka, ... Arthritis & Rheumatology 71 (7), 1034-1041, 2019 | 25 | 2019 |
| Comparing RNA secondary structures using a relaxed base-pair score P Agius, KP Bennett, M Zuker RNA 16 (5), 865-878, 2010 | 25 | 2010 |
| Typing Staphylococcus aureus using the spa gene and novel distance measures P Agius, B Kreiswirth, S Naidich, K Bennett IEEE/ACM transactions on computational biology and bioinformatics 4 (4), 693-704, 2007 | 25 | 2007 |
| Machine learning integration of scleroderma histology and gene expression identifies fibroblast polarisation as a hallmark of clinical severity and improvement K Showalter, R Spiera, C Magro, P Agius, V Martyanov, JM Franks, ... Annals of the rheumatic diseases 80 (2), 228-237, 2021 | 24 | 2021 |
| Ranking genes by their co‐expression to subsets of pathway members P Adler, H Peterson, P Agius, J Reimand, J Vilo Annals of the New York Academy of Sciences 1158 (1), 1-13, 2009 | 14 | 2009 |
| Bayesian unsupervised learning with multiple data types P Agius, Y Ying, C Campbell Statistical applications in genetics and molecular biology 8 (1), 2009 | 13 | 2009 |
| Sequencing and curation strategies for identifying candidate glioblastoma treatments MO Frank, T Koyama, K Rhrissorrakrai, N Robine, F Utro, AK Emde, ... BMC medical genomics 12, 1-16, 2019 | 9 | 2019 |
Christina LeslieMemorial Sloan Kettering Cancer CenterVerified email at mskcc.org
