Nicholas Luscombe

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Jernej UleThe Francis Crick Institute, UK Dementia Research Institute at King's, Institute of ChemistryVerified email at crick.ac.uk
Mark GersteinProfessor of Biomedical Informatics, Yale UniversityVerified email at yale.edu
Juan M VaquerizasMRC London Institute of Medical SciencesVerified email at lms.mrc.ac.uk
Paul BertoneBrown UniversityVerified email at brown.edu
Aswin Sai Narain SeshasayeeNational Centre for Biological Sciences, Tata Institute of Fundamental ResearchVerified email at ncbs.res.in
Michael SnyderStanford UniversityVerified email at stanford.edu
Janet M ThorntonSenior Scientist, European Molecular Biology Laboratory - European Institute of Bioinformatics (EMBLVerified email at ebi.ac.uk
Kathi ZarnackBuchmann Institute for Molecular Life Sciences (BMLS)Verified email at bmls.de
Tomaž CurkUniversity of Ljubljana, Faculty of Computer and Information ScienceVerified email at fri.uni-lj.si
Julian KönigInstitute of Molecular Biology, MainzVerified email at imb-mainz.de
Sarah A. TeichmannWellcome Sanger Institute & University of CambridgeVerified email at cam.ac.uk
Asifa AkhtarMax Planck Institute of Immunobiology and EpigeneticsVerified email at ie-freiburg.mpg.de
Raphaelle LuisierGroup Leader, Idiap Research Institute, SIB Swiss Institute of Bioinformatics, SwitzerlandVerified email at idiap.ch
Haiyuan YuProfessor, Cornell UniversityVerified email at cornell.edu
M. Madan BabuMember and Endowed Chair, St Jude Children's Research Hospital, USAVerified email at stjude.org
Filipe Tavares-CadeteiMM - Instituto de Medicina Molecular João Lobo AntunesVerified email at medicina.ulisboa.pt
Borbala MifsudAssistant Professor, Hamad Bin Khalifa UniversityVerified email at hbku.edu.qa
Peter FraserDept of Biological Science, Florida State UniversityVerified email at fsu.edu
Stefan SchoenfelderGroup Leader at the Babraham InstituteVerified email at babraham.ac.uk
Inigo MartincorenaWellcome Sanger InstituteVerified email at sanger.ac.uk

Nicholas Luscombe

Okinawa Institute of Science and Technology Graduate University

Verified email at oist.jp

bioinformatics genomics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012	12461	2012
A census of human transcription factors: function, expression and evolution JM Vaquerizas, SK Kummerfeld, SA Teichmann, NM Luscombe Nature Reviews Genetics 10 (4), 252-263, 2009	1756	2009
A user's guide to the encyclopedia of DNA elements (ENCODE) ENCODE Project Consortium PLoS biology 9 (4), e1001046, 2011	1380	2011
DNA-binding specificities of human transcription factors A Jolma, J Yan, T Whitington, J Toivonen, KR Nitta, P Rastas, ... Cell 152 (1-2), 327-339, 2013	1196	2013
Genomic analysis of regulatory network dynamics reveals large topological changes NM Luscombe, M Madan Babu, H Yu, M Snyder, SA Teichmann, ... Nature 431 (7006), 308-312, 2004	1164	2004
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution J König, K Zarnack, G Rot, T Curk, M Kayikci, B Zupan, DJ Turner, ... Nature structural & molecular biology 17 (7), 909-915, 2010	1100	2010
Amino acid–base interactions: a three-dimensional analysis of protein–DNA interactions at an atomic level NM Luscombe, RA Laskowski, JM Thornton Nucleic acids research 29 (13), 2860-2874, 2001	1082	2001
Structure and evolution of transcriptional regulatory networks MM Babu, NM Luscombe, L Aravind, M Gerstein, SA Teichmann Current opinion in structural biology 14 (3), 283-291, 2004	1006	2004
Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C B Mifsud, F Tavares-Cadete, AN Young, R Sugar, S Schoenfelder, ... Nature genetics 47 (6), 598-606, 2015	905	2015
An overview of the structures of protein-DNA complexes NM Luscombe, SE Austin, HM Berman, JM Thornton Genome biology 1, 1-37, 2000	812	2000
What is bioinformatics? A proposed definition and overview of the field NM Luscombe, D Greenbaum, M Gerstein Methods of information in medicine 40 (4), 346-358, 2001	747	2001
Annotation transfer between genomes: protein–protein interologs and protein–DNA regulogs H Yu, NM Luscombe, HX Lu, X Zhu, Y Xia, JDJ Han, N Bertin, S Chung, ... Genome research 14 (6), 1107-1118, 2004	676	2004
Protein clefts in molecular recognition and function. RA Laskowski, NM Luscombe, MB Swindells, JM Thornton Protein science: a publication of the Protein Society 5 (12), 2438, 1996	585	1996
Protein–RNA interactions: a structural analysis S Jones, DTA Daley, NM Luscombe, HM Berman, JM Thornton Nucleic acids research 29 (4), 943-954, 2001	510	2001
Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities A Jolma, T Kivioja, J Toivonen, L Cheng, G Wei, M Enge, M Taipale, ... Genome research 20 (6), 861-873, 2010	473	2010
Deterministic evolutionary trajectories influence primary tumor growth: TRACERx renal S Turajlic, H Xu, K Litchfield, A Rowan, S Horswell, T Chambers, ... Cell 173 (3), 595-610. e11, 2018	440	2018
Protein–RNA interactions: new genomic technologies and perspectives J König, K Zarnack, NM Luscombe, J Ule Nature Reviews Genetics 13 (2), 77-83, 2012	433	2012
Direct Competition between hnRNP C and U2AF65 Protects the Transcriptome from the Exonization of Alu Elements K Zarnack, J König, M Tajnik, I Martincorena, S Eustermann, I Stévant, ... Cell 152 (3), 453-466, 2013	423	2013
The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements S Schoenfelder, M Furlan-Magaril, B Mifsud, F Tavares-Cadete, R Sugar, ... Genome research 25 (4), 582-597, 2015	414	2015
Distribution of NF-κB-binding sites across human chromosome 22 R Martone, G Euskirchen, P Bertone, S Hartman, TE Royce, ... Proceedings of the National Academy of Sciences 100 (21), 12247-12252, 2003	404	2003

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