| Prediction of potential GPI-modification sites in proprotein sequences B Eisenhaber, P Bork, F Eisenhaber Journal of molecular biology 292 (3), 741-758, 1999 | 526 | 1999 |
| A sensitive predictor for potential GPI lipid modification sites in fungal protein sequences and its application to genome-wide studies for Aspergillus nidulans, Candida … B Eisenhaber, G Schneider, M Wildpaner, F Eisenhaber Journal of molecular biology 337 (2), 243-253, 2004 | 351 | 2004 |
| N-terminal N-myristoylation of proteins: prediction of substrate proteins from amino acid sequence S Maurer-Stroh, B Eisenhaber, F Eisenhaber Journal of molecular biology 317 (4), 541-557, 2002 | 292 | 2002 |
| Sequence properties of GPI-anchored proteins near the omega-site: constraints for the polypeptide binding site of the putative transamidase. B Eisenhaber, P Bork, F Eisenhaber Protein engineering 11 (12), 1155-1161, 1998 | 287 | 1998 |
| PSIC: profile extraction from sequence alignments with position-specific counts of independent observations SR Sunyaev, F Eisenhaber, IV Rodchenkov, B Eisenhaber, VG Tumanyan, ... Protein engineering 12 (5), 387-394, 1999 | 272 | 1999 |
| Prediction of peroxisomal targeting signal 1 containing proteins from amino acid sequence G Neuberger, S Maurer-Stroh, B Eisenhaber, A Hartig, F Eisenhaber Journal of molecular biology 328 (3), 581-592, 2003 | 257 | 2003 |
| N-terminal N-myristoylation of proteins: refinement of the sequence motif and its taxon-specific differences S Maurer-Stroh, B Eisenhaber, F Eisenhaber Journal of molecular biology 317 (4), 523-540, 2002 | 232 | 2002 |
| Post-translational GPI lipid anchor modification of proteins in kingdoms of life: analysis of protein sequence data from complete genomes B Eisenhaber, P Bork, F Eisenhaber Protein engineering 14 (1), 17-25, 2001 | 228 | 2001 |
| Glycosylphosphatidylinositol lipid anchoring of plant proteins. Sensitive prediction from sequence-and genome-wide studies for Arabidopsis and rice B Eisenhaber, M Wildpaner, CJ Schultz, GHH Borner, P Dupree, ... Plant physiology 133 (4), 1691-1701, 2003 | 226 | 2003 |
| Enzymes and auxiliary factors for GPI lipid anchor biosynthesis and post‐translational transfer to proteins B Eisenhaber, S Maurer‐Stroh, M Novatchkova, G Schneider, ... Bioessays 25 (4), 367-385, 2003 | 203 | 2003 |
| Motif refinement of the peroxisomal targeting signal 1 and evaluation of taxon-specific differences G Neuberger, S Maurer-Stroh, B Eisenhaber, A Hartig, F Eisenhaber Journal of molecular biology 328 (3), 567-579, 2003 | 195 | 2003 |
| On filtering false positive transmembrane protein predictions M Cserzö, F Eisenhaber, B Eisenhaber, I Simon Protein engineering 15 (9), 745-752, 2002 | 175 | 2002 |
| The ring between ring fingers (RBR) protein family B Eisenhaber, N Chumak, F Eisenhaber, MT Hauser Genome biology 8, 1-10, 2007 | 149 | 2007 |
| Automated annotation of GPI anchor sites: case study C. elegans B Eisenhaber, P Bork, Y Yuan, G Löffler, F Eisenhaber Trends in biochemical sciences 25 (7), 340-341, 2000 | 143 | 2000 |
| TM or not TM: transmembrane protein prediction with low false positive rate using DAS-TMfilter M Cserzo, F Eisenhaber, B Eisenhaber, I Simon Bioinformatics 20 (1), 136-137, 2004 | 120 | 2004 |
| Prediction of lipid posttranslational modifications and localization signals from protein sequences: big-Π, NMT and PTS1 F Eisenhaber, B Eisenhaber, W Kubina, S Maurer-Stroh, G Neuberger, ... Nucleic acids research 31 (13), 3631-3634, 2003 | 111 | 2003 |
| Powerful sequence similarity search methods and in-depth manual analyses can identify remote homologs in many apparently “orphan” viral proteins DB Kuchibhatla, WA Sherman, BYW Chung, S Cook, G Schneider, ... Journal of virology 88 (1), 10-20, 2014 | 99 | 2014 |
| Charged residues next to transmembrane regions revisited:“Positive-inside rule” is complemented by the “negative inside depletion/outside enrichment rule” JA Baker, WC Wong, B Eisenhaber, J Warwicker, F Eisenhaber BMC biology 15, 1-29, 2017 | 95 | 2017 |
| SPACER: server for predicting allosteric communication and effects of regulation A Goncearenco, S Mitternacht, T Yong, B Eisenhaber, F Eisenhaber, ... Nucleic acids research 41 (W1), W266-W272, 2013 | 90 | 2013 |
| Prediction of posttranslational modification of proteins from their amino acid sequence B Eisenhaber, F Eisenhaber Data Mining Techniques for the Life Sciences, 365-384, 2010 | 78 | 2010 |
