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Liana Lareau
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The transcriptional landscape of the mammalian genome
P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ...
Science 309 (5740), 1559-1563, 2005
40112005
Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes
NT Ingolia, LF Lareau, JS Weissman
Cell, 2011
22572011
Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements
LF Lareau, M Inada, RE Green, JC Wengrod, SE Brenner
Nature 446 (7138), 926-929, 2007
7152007
Transmission, infectivity, and neutralization of a spike L452R SARS-CoV-2 variant
X Deng, MA Garcia-Knight, MM Khalid, V Servellita, C Wang, MK Morris, ...
Cell, 2021
669*2021
The evolving roles of alternative splicing
LF Lareau, RE Green, RS Bhatnagar, SE Brenner
Current opinion in structural biology 14 (3), 273-282, 2004
4032004
Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments.
LF Lareau, DH Hite, GJ Hogan, PO Brown
eLife, e01257-e01257, 2014
3322014
The coupling of alternative splicing and nonsense-mediated mRNA decay
LF Lareau, AN Brooks, DAW Soergel, Q Meng, SE Brenner
Alternative Splicing in the Postgenomic Era 623, 2007
2742007
Widespread predicted nonsense-mediated mRNA decay of alternatively-spliced transcripts of human normal and disease genes
RE Green, BP Lewis, RT Hillman, M Blanchette, LF Lareau, AT Garnett, ...
Bioinformatics 19 (suppl 1), i118-i121, 2003
2092003
Accelerated RNA detection using tandem CRISPR nucleases
TY Liu, GJ Knott, DCJ Smock, JJ Desmarais, S Son, A Bhuiya, ...
Nature chemical biology 17 (9), 982-988, 2021
1482021
Regulation of splicing factors by alternative splicing and NMD is conserved between kingdoms yet evolutionarily flexible
LF Lareau, SE Brenner
Molecular biology and evolution 32 (4), 1072-1079, 2015
1472015
Genome-wide identification of alternative splice forms down-regulated by nonsense-mediated mRNA decay in Drosophila
KD Hansen, LF Lareau, M Blanchette, RE Green, Q Meng, J Rehwinkel, ...
PLoS Genet 5 (6), e1000525, 2009
1052009
Accurate design of translational output by a neural network model of ribosome distribution
RJ Tunney, NJ McGlincy, ME Graham, N Naddaf, L Pachter, L Lareau
Nature Structure & Molecular Biology, 2018
772018
Rapid detection of SARS-CoV-2 RNA in saliva via Cas13
SS Chandrasekaran, S Agrawal, A Fanton, AR Jangid, B Charrez, ...
Nature Biomedical Engineering, 1-13, 2022
76*2022
Methods for genome assembly and haplotype phasing
RE Green, LF Lareau
US Patent 9,411,930, 2016
492016
Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling
ES Rice, S Kohno, JS John, S Pham, J Howard, LF Lareau, BL O'Connell, ...
Genome Research 27 (5), 686-696, 2017
432017
Regulation of gene expression by coupling of alternative splicing and NMD
DAW Soergel, LF Lareau, SE Brenner
Nonsense-mediated mRNA decay, L. Maquat, ed (Georgetown, Texas: Landes …, 2006
40*2006
Coverage-dependent bias creates the appearance of binary splicing in single cells
CF Buen Abad Najar, N Yosef, LF Lareau
eLife, 2020
392020
Identifying cell state–associated alternative splicing events and their coregulation
CF Buen Abad Najar, P Burra, N Yosef, LF Lareau
Genome Research, 2022
92022
Streamlined and sensitive mono- and di-ribosome profiling in yeast and human cells
L Ferguson, HE Upton, SC Pimentel, A Mok, LF Lareau, K Collins, ...
Nature Methods 20 (11), 1704–1715, 2023
72023
riboviz 2: A flexible and robust ribosome profiling data analysis and visualization workflow
AL Cope, F Anderson, J Favate, M Jackson, A Mok, A Kurowska, J Liu, ...
Bioinformatics 38 (8), 2358-2360, 2022
42022
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