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João Carlos Setubal
João Carlos Setubal
Professor of Bioinformatics, University of Sao Paulo
Verified email at iq.usp.br - Homepage
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Cited by
Cited by
Year
Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
ACR da Silva, JA Ferro, FDC Reinach, CS Farah, LR Furlan, RB Quaggio, ...
Nature 417 (6887), 459-463, 2002
14032002
The genome of woodland strawberry (Fragaria vesca)
V Shulaev, DJ Sargent, RN Crowhurst, TC Mockler, O Folkerts, ...
Nature genetics 43 (2), 109-116, 2011
13332011
Introduction to computational molecular biology
JC Setubal, J Meidanis, . ̤ Setubal-Meidanis
PWS Pub., 1997
12491997
The genome sequence of the plant pathogen Xylella fastidiosa
AJG Simpson, FC Reinach, P Arruda, FA Abreu, M Acencio, R Alvarenga, ...
Nature 406 (6792), 151-157, 2000
11102000
The Genome of the Natural Genetic Engineer Agrobacterium tumefaciens C58
DW Wood, JC Setubal, R Kaul, DE Monks, JP Kitajima, VK Okura, Y Zhou, ...
science 294 (5550), 2317-2323, 2001
9972001
Support vector machines: Theory and applications
T Evgeniou, M Pontil
Advanced course on artificial intelligence, 249-257, 1999
794*1999
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation
AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ...
Nature medicine 25 (4), 667-678, 2019
6972019
Transcriptome analysis of the acoelomate human parasite Schistosoma mansoni
S Verjovski-Almeida, R DeMarco, EAL Martins, PEM Guimarães, ...
Nature genetics 35 (2), 148-157, 2003
6182003
Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology
TT Tseng, BM Tyler, JC Setubal
BMC microbiology 9, 1-9, 2009
5672009
Comparative Genomics of Two Leptospira interrogans Serovars Reveals Novel Insights into Physiology and Pathogenesis
A Nascimento, AI Ko, EAL Martins, CB Monteiro-Vitorello, PL Ho, ...
Journal of bacteriology 186 (7), 2164-2172, 2004
5662004
Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes
PC Dos Santos, Z Fang, SW Mason, JC Setubal, R Dixon
BMC genomics 13, 1-12, 2012
5032012
Comparative Analyses of the Complete Genome Sequences of Pierce's Disease and Citrus Variegated Chlorosis Strains of Xylella fastidiosa
MA Van Sluys, MC De Oliveira, CB Monteiro-Vitorello, CY Miyaki, ...
Journal of bacteriology 185 (3), 1018-1026, 2003
4002003
Genome Sequence of Azotobacter vinelandii, an Obligate Aerobe Specialized To Support Diverse Anaerobic Metabolic Processes
JC Setubal, P Dos Santos, BS Goldman, H Ertesvag, G Espin, LM Rubio, ...
Journal of bacteriology 191 (14), 4534-4545, 2009
3442009
The Candidatus Liberibacter–Host Interface: Insights into Pathogenesis Mechanisms and Disease Control
N Wang, EA Pierson, JC Setubal, J Xu, JG Levy, Y Zhang, J Li, LT Rangel, ...
Annual review of phytopathology 55 (1), 451-482, 2017
3022017
Genome features of Leptospira interrogans serovar Copenhageni
A Nascimento, S Verjovski-Almeida, MA Van Sluys, CB Monteiro-Vitorello, ...
Brazilian Journal of Medical and Biological Research 37, 459-477, 2004
2792004
Genome Sequences of Three Agrobacterium Biovars Help Elucidate the Evolution of Multichromosome Genomes in Bacteria
SC Slater, BS Goldman, B Goodner, JC Setubal, SK Farrand, EW Nester, ...
Journal of bacteriology 191 (8), 2501-2511, 2009
2742009
Butyrate protects mice from Clostridium difficile-induced colitis through an HIF-1-dependent mechanism
JL Fachi, J de Souza Felipe, LP Pral, BK da Silva, RO Corrêa, ...
Cell reports 27 (3), 750-761. e7, 2019
2702019
The Plant Pathogen Pseudomonas syringae pv. tomato Is Genetically Monomorphic and under Strong Selection to Evade Tomato Immunity
R Cai, J Lewis, S Yan, H Liu, CR Clarke, F Campanile, NF Almeida, ...
PLoS pathogens 7 (8), e1002130, 2011
2702011
Lipoprotein computational prediction in spirochaetal genomes
JC Setubal, M Reis, J Matsunaga, DA Haake
Microbiology 152 (1), 113-121, 2006
2432006
Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics
LP Antunes, LF Martins, RV Pereira, AM Thomas, D Barbosa, LN Lemos, ...
Scientific reports 6 (1), 38915, 2016
2402016
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