Marat Kazanov
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RegPrecise 3.0–a resource for genome-scale exploration of transcriptional regulation in bacteria
PS Novichkov, AE Kazakov, DA Ravcheev, SA Leyn, GY Kovaleva, ...
BMC genomics 14 (1), 1-12, 2013
Pan-cancer analysis of whole genomes
I The, TPCA of Whole, Genomes Consortium
Nature 578 (7793), 82, 2020
The repertoire of mutational signatures in human cancer
LB Alexandrov, J Kim, NJ Haradhvala, MN Huang, AWT Ng, Y Wu, A Boot, ...
Nature 578 (7793), 94-101, 2020
Evaluation and comparison of current fetal ultrasound image segmentation methods for biometric measurements: a grand challenge
S Rueda, S Fathima, CL Knight, M Yaqub, AT Papageorghiou, ...
IEEE Transactions on medical imaging 33 (4), 797-813, 2013
Predicting human olfactory perception from chemical features of odor molecules
A Keller, RC Gerkin, Y Guan, A Dhurandhar, G Turu, B Szalai, ...
Science 355 (6327), 820-826, 2017
Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open …
J Guinney, T Wang, TD Laajala, KK Winner, JC Bare, EC Neto, SA Khan, ...
The Lancet Oncology 18 (1), 132-142, 2017
Evolution of pan-genomes of Escherichia coli, Shigella spp., and Salmonella enterica
EN Gordienko, MD Kazanov, MS Gelfand
Journal of bacteriology 195 (12), 2786-2792, 2013
Functional specialization in proline biosynthesis of melanoma
J De Ingeniis, B Ratnikov, AD Richardson, DA Scott, P Aza-Blanc, SK De, ...
PloS one 7 (9), e45190, 2012
Complete genome and proteome of Acholeplasma laidlawii
VN Lazarev, SA Levitskii, YI Basovskii, MM Chukin, TA Akopian, ...
Journal of bacteriology 193 (18), 4943-4953, 2011
Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus
DA Rodionov, PS Novichkov, ED Stavrovskaya, IA Rodionova, X Li, ...
BMC genomics 12 (S1), S3, 2011
Abundance and functional diversity of riboswitches in microbial communities
MD Kazanov, AG Vitreschak, MS Gelfand
BMC genomics 8 (1), 347, 2007
APOBEC-induced cancer mutations are uniquely enriched in early-replicating, gene-dense, and active chromatin regions
MD Kazanov, SA Roberts, P Polak, J Stamatoyannopoulos, LJ Klimczak, ...
Cell reports 13 (6), 1103-1109, 2015
Basis for substrate recognition and distinction by matrix metalloproteinases
BI Ratnikov, P Cieplak, K Gramatikoff, J Pierce, A Eroshkin, Y Igarashi, ...
Proceedings of the National Academy of Sciences 111 (40), E4148-E4155, 2014
Structural determinants of limited proteolysis
MD Kazanov, Y Igarashi, AM Eroshkin, P Cieplak, B Ratnikov, Y Zhang, ...
Journal of proteome research 10 (8), 3642-3651, 2011
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ...
Nature 578 (7793), 102-111, 2020
Genomic reconstruction of the transcriptional regulatory network in Bacillus subtilis
SA Leyn, MD Kazanov, NV Sernova, EO Ermakova, PS Novichkov, ...
Journal of bacteriology 195 (11), 2463-2473, 2013
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ...
Nature communications 10 (1), 1-17, 2019
ANA HEp-2 cells image classification using number, size, shape and localization of targeted cell regions
GV Ponomarev, VL Arlazarov, MS Gelfand, MD Kazanov
Pattern Recognition 47 (7), 2360-2366, 2014
Comparative genomics of metabolic capacities of regulons controlled by cis-regulatory RNA motifs in bacteria
EI Sun, SA Leyn, MD Kazanov, MH Saier, PS Novichkov, DA Rodionov
BMC genomics 14 (1), 597, 2013
Genomic reconstruction of transcriptional regulatory networks in lactic acid bacteria
DA Ravcheev, AA Best, NV Sernova, MD Kazanov, PS Novichkov, ...
BMC genomics 14 (1), 94, 2013
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