Jonathan Lees
Jonathan Lees
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Transient protein-protein interactions: structural, functional, and network properties
JR Perkins, I Diboun, BH Dessailly, JG Lees, C Orengo
Structure 18 (10), 1233-1243, 2010
CATH: comprehensive structural and functional annotations for genome sequences
I Sillitoe, TE Lewis, A Cuff, S Das, P Ashford, NL Dawson, N Furnham, ...
Nucleic acids research 43 (D1), D376-D381, 2015
A reference database for circular dichroism spectroscopy covering fold and secondary structure space
JG Lees, AJ Miles, F Wien, BA Wallace
Bioinformatics 22 (16), 1955-1962, 2006
CATH: an expanded resource to predict protein function through structure and sequence
NL Dawson, TE Lewis, S Das, JG Lees, D Lee, P Ashford, CA Orengo, ...
Nucleic acids research 45 (D1), D289-D295, 2017
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 1-19, 2016
CDtool—an integrated software package for circular dichroism spectroscopic data processing, analysis, and archiving
JG Lees, BR Smith, F Wien, AJ Miles, BA Wallace
Analytical biochemistry 332 (2), 285-289, 2004
New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures
I Sillitoe, AL Cuff, BH Dessailly, NL Dawson, N Furnham, D Lee, JG Lees, ...
Nucleic acids research 41 (D1), D490-D498, 2012
Analyses of circular dichroism spectra of membrane proteins
BA Wallace, JG Lees, AJW Orry, A Lobley, RW Janes
Protein Science 12 (4), 875-884, 2003
The Pain in Neuropathy Study (PiNS): a cross-sectional observational study determining the somatosensory phenotype of painful and painless diabetic neuropathy
AC Themistocleous, JD Ramirez, PR Shillo, JG Lees, D Selvarajah, ...
Pain 157 (5), 1132, 2016
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20 (1), 1-23, 2019
Calibration and standardisation of synchrotron radiation circular dichroism and conventional circular dichroism spectrophotometers
AJ Miles, F Wien, JG Lees, A Rodger, RW Janes, BA Wallace
Spectroscopy 17 (4), 653-661, 2003
Gene3D: extensive prediction of globular domains in proteins
TE Lewis, I Sillitoe, N Dawson, SD Lam, T Clarke, D Lee, C Orengo, ...
Nucleic acids research 46 (D1), D435-D439, 2018
Gene3D: comprehensive structural and functional annotation of genomes
C Yeats, J Lees, A Reid, P Kellam, N Martin, X Liu, C Orengo
Nucleic acids research 36 (suppl_1), D414-D418, 2007
Gene3D: a domain-based resource for comparative genomics, functional annotation and protein network analysis
J Lees, C Yeats, J Perkins, I Sillitoe, R Rentzsch, BH Dessailly, C Orengo
Nucleic acids research 40 (D1), D465-D471, 2012
Functional classification of CATH superfamilies: a domain-based approach for protein function annotation
S Das, D Lee, I Sillitoe, NL Dawson, JG Lees, CA Orengo
Bioinformatics 31 (21), 3460-3467, 2015
SARS-CoV-2 spike protein predicted to form complexes with host receptor protein orthologues from a broad range of mammals
SD Lam, N Bordin, VP Waman, HM Scholes, P Ashford, N Sen, ...
Scientific reports 10 (1), 1-14, 2020
CATH: expanding the horizons of structure-based functional annotations for genome sequences
I Sillitoe, N Dawson, TE Lewis, S Das, JG Lees, P Ashford, A Tolulope, ...
Nucleic acids research 47 (D1), D280-D284, 2019
Gene3D: expanding the utility of domain assignments
SD Lam, NL Dawson, S Das, I Sillitoe, P Ashford, D Lee, S Lehtinen, ...
Nucleic acids research 44 (D1), D404-D409, 2016
Calibration and standardisation of synchrotron radiation and conventional circular dichroism spectrometers. Part 2: Factors affecting magnitude and wavelength
AJ Miles, F Wien, JG Lees, BA Wallace
Spectroscopy 19 (1), 43-51, 2005
Gene3D: merging structure and function for a Thousand genomes
J Lees, C Yeats, O Redfern, A Clegg, C Orengo
Nucleic acids research 38 (suppl_1), D296-D300, 2010
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