Adriano Barbosa-Silva
Adriano Barbosa-Silva
Co-founder & Senior Bioinformatics Scientist - ITTM S.A.
Bestätigte E-Mail-Adresse bei - Startseite
Zitiert von
Zitiert von
MedlineRanker: flexible ranking of biomedical literature
JF Fontaine, A Barbosa-Silva, M Schaefer, MR Huska, EM Muro, ...
Nucleic acids research 37 (suppl_2), W141-W146, 2009
A reference guide for tree analysis and visualization
GA Pavlopoulos, TG Soldatos, A Barbosa-Silva, R Schneider
BioData mining 3, 1-24, 2010
Moving pieces in a taxonomic puzzle: venom 2D-LC/MS and data clustering analyses to infer phylogenetic relationships in some scorpions from the Buthidae family (Scorpiones)
DG Nascimento, B Rates, DM Santos, T Verano-Braga, A Barbosa-Silva, ...
Toxicon 47 (6), 628-639, 2006
uORFdb—a comprehensive literature database on eukaryotic uORF biology
K Wethmar, A Barbosa-Silva, MA Andrade-Navarro, A Leutz
Nucleic acids research 42 (D1), D60-D67, 2014
Genie: literature-based gene prioritization at multi genomic scale
JF Fontaine, F Priller, A Barbosa-Silva, MA Andrade-Navarro
Nucleic acids research 39 (suppl_2), W455-W461, 2011
PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries
A Barbosa-Silva, JF Fontaine, ER Donnard, F Stussi, JM Ortega, ...
BMC bioinformatics 12, 1-9, 2011
Integration and visualization of translational medicine data for better understanding of human diseases
V Satagopam, W Gu, S Eifes, P Gawron, M Ostaszewski, S Gebel, ...
Big data 4 (2), 97-108, 2016
Laitor-literature assistant for identification of terms co-occurrences and relationships
A Barbosa-Silva, TG Soldatos, ILF Magalhães, GA Pavlopoulos, ...
BMC bioinformatics 11, 1-10, 2010
Abundance and diversity of resistance genes in the sugarcane transcriptome revealed by in silico analysis.
AC Wanderley-Nogueira, NM Soares-Cavalcanti, DAL Morais, ...
Genetics and Molecular Research 6 (4), 866-89, 2007
Martini: using literature keywords to compare gene sets
TG Soldatos, SI O'Donoghue, VP Satagopam, LJ Jensen, NP Brown, ...
Nucleic acids research 38 (1), 26-38, 2010
In silico survey of resistance (R) genes in Eucalyptus transcriptome
A Barbosa-da-Silva, AC Wanderley-Nogueira, RRM Silva, LC Berlarmino, ...
Genetics and Molecular Biology 28, 562-574, 2005
SmartR: an open-source platform for interactive visual analytics for translational research data
S Herzinger, W Gu, V Satagopam, S Eifes, K Rege, A Barbosa-Silva, ...
Bioinformatics 33 (14), 2229-2231, 2017
A curated, ontology-based, large-scale knowledge graph of artificial intelligence tasks and benchmarks
K Blagec, A Barbosa-Silva, S Ott, M Samwald
Scientific Data 9 (1), 322, 2022
Modulation of defence and iron homeostasis genes in rice roots by the diazotrophic endophyte Herbaspirillum seropedicae
LCC Brusamarello-Santos, D Alberton, G Valdameri, D Camilios-Neto, ...
Scientific reports 9 (1), 10573, 2019
Mapping global dynamics of benchmark creation and saturation in artificial intelligence
S Ott, A Barbosa-Silva, K Blagec, J Brauner, M Samwald
Nature Communications 13 (1), 6793, 2022
Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence
A Barbosa-Silva, VP Satagopam, R Schneider, JM Ortega
BMC bioinformatics 9, 1-14, 2008
Preimplantation development regulatory pathway construction through a text-mining approach
E Donnard, A Barbosa-Silva, RLM Guedes, GR Fernandes, H Velloso, ...
BMC genomics 12, 1-13, 2011
A procedure to recruit members to enlarge protein family databases--the building of UECOG (UniRef-Enriched COG Database) as a model.
GR Fernandes, A Barbosa Da Silva, F Prosdocimi, IA Pena, ...
Genetics and Molecular Research 7 (3), 910-24, 2008
Caipirini: using gene sets to rank literature
TG Soldatos, SI O'Donoghue, VP Satagopam, A Barbosa-Silva, ...
BioData mining 5, 1-14, 2012
A guide for building biological pathways along with two case studies: hair and breast development
D Trindade, LA Orsine, A Barbosa-Silva, ER Donnard, JM Ortega
Methods 74, 16-35, 2015
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