| A unique chromatin signature uncovers early developmental enhancers in humans A Rada-Iglesias, R Bajpai, T Swigut, SA Brugmann, RA Flynn, J Wysocka Nature 470 (7333), 279-283, 2011 | 2518 | 2011 |
| A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression KC Wang, YW Yang, B Liu, A Sanyal, R Corces-Zimmerman, Y Chen, ... Nature 472 (7341), 120-124, 2011 | 2223 | 2011 |
| c-Myc regulates transcriptional pause release PB Rahl, CY Lin, AC Seila, RA Flynn, S McCuine, CB Burge, PA Sharp, ... Cell 141 (3), 432-445, 2010 | 1475 | 2010 |
| m6A RNA Modification Controls Cell Fate Transition in Mammalian Embryonic Stem Cells PJ Batista, B Molinie, J Wang, K Qu, J Zhang, L Li, DM Bouley, E Lujan, ... Cell Stem Cell, 2014 | 1226 | 2014 |
| Systematic discovery of Xist RNA binding proteins C Chu, QC Zhang, ST Da Rocha, RA Flynn, M Bharadwaj, JM Calabrese, ... Cell 161 (2), 404-416, 2015 | 1122 | 2015 |
| HiChIP: efficient and sensitive analysis of protein-directed genome architecture MR Mumbach, AJ Rubin, RA Flynn, C Dai, PA Khavari, WJ Greenleaf, ... Nature methods 13 (11), 919-922, 2016 | 1075 | 2016 |
| Control of somatic tissue differentiation by the long non-coding RNA TINCR M Kretz, Z Siprashvili, C Chu, DE Webster, A Zehnder, K Qu, CS Lee, ... Nature 493 (7431), 231-235, 2013 | 1042 | 2013 |
| Divergent transcription from active promoters AC Seila, JM Calabrese, SS Levine, GW Yeo, PB Rahl, RA Flynn, ... science 322 (5909), 1849-1851, 2008 | 1038 | 2008 |
| Structural imprints in vivo decode RNA regulatory mechanisms RC Spitale, RA Flynn, QC Zhang, P Crisalli, B Lee, JW Jung, ... Nature 519 (7544), 486-490, 2015 | 772 | 2015 |
| Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells EJ Grow, RA Flynn, SL Chavez, NL Bayless, M Wossidlo, DJ Wesche, ... Nature 522 (7555), 221-225, 2015 | 662 | 2015 |
| RNA duplex map in living cells reveals higher-order transcriptome structure Z Lu, QC Zhang, B Lee, RA Flynn, MA Smith, JT Robinson, C Davidovich, ... Cell 165 (5), 1267-1279, 2016 | 633 | 2016 |
| Landscape and variation of RNA secondary structure across the human transcriptome Y Wan, K Qu, QC Zhang, RA Flynn, O Manor, Z Ouyang, J Zhang, ... Nature 505 (7485), 706-709, 2014 | 601 | 2014 |
| Long noncoding RNAs in cell-fate programming and reprogramming RA Flynn, HY Chang Cell stem cell 14 (6), 752-761, 2014 | 587 | 2014 |
| Enhancer connectome in primary human cells identifies target genes of disease-associated DNA elements MR Mumbach, AT Satpathy, EA Boyle, C Dai, BG Gowen, SW Cho, ... Nature genetics 49 (11), 1602-1612, 2017 | 491 | 2017 |
| Quantitative analysis of EGFRvIII cellular signaling networks reveals a combinatorial therapeutic strategy for glioblastoma PH Huang, A Mukasa, R Bonavia, RA Flynn, ZE Brewer, WK Cavenee, ... Proceedings of the National Academy of Sciences 104 (31), 12867-12872, 2007 | 482 | 2007 |
| RNA SHAPE analysis in living cells RC Spitale, P Crisalli, RA Flynn, EA Torre, ET Kool, HY Chang Nature chemical biology 9 (1), 18-20, 2013 | 458 | 2013 |
| Small RNAs are modified with N-glycans and displayed on the surface of living cells RA Flynn, K Pedram, SA Malaker, PJ Batista, BAH Smith, AG Johnson, ... Cell 184 (12), 3109-3124. e22, 2021 | 429 | 2021 |
| The mammalian ribo-interactome reveals ribosome functional diversity and heterogeneity D Simsek, GC Tiu, RA Flynn, GW Byeon, K Leppek, AF Xu, HY Chang, ... Cell 169 (6), 1051-1065. e18, 2017 | 428 | 2017 |
| Progenitor identification and SARS-CoV-2 infection in human distal lung organoids AA Salahudeen, SS Choi, A Rustagi, J Zhu, V van Unen, SM de la O, ... Nature 588 (7839), 670-675, 2020 | 362 | 2020 |
| RNA helicase DDX21 coordinates transcription and ribosomal RNA processing E Calo, RA Flynn, L Martin, RC Spitale, HY Chang, J Wysocka Nature 518 (7538), 249-253, 2015 | 324 | 2015 |
Howard Y. ChangChief Scientific Officer, AmgenVerified email at stanford.edu
