| Gene selection for microarray data classification using a novel ant colony optimization S Tabakhi, A Najafi, R Ranjbar, P Moradi Neurocomputing 168, 1024-1036, 2015 | 175 | 2015 |
| A hybrid gene selection algorithm for microarray cancer classification using genetic algorithm and learning automata H Motieghader, A Najafi, B Sadeghi, A Masoudi-Nejad Informatics in Medicine Unlocked 9, 246-254, 2017 | 127 | 2017 |
| Natural antisense RNAs as mRNA regulatory elements in bacteria: a review on function and applications F Saberi, M Kamali, A Najafi, A Yazdanparast, MM Moghaddam Cellular & molecular biology letters 21, 1-17, 2016 | 95 | 2016 |
| Classification and biomarker genes selection for cancer gene expression data using random forest M Ram, A Najafi, MT Shakeri Iranian journal of pathology 12 (4), 339, 2017 | 83 | 2017 |
| Utilization of highly robust and selective crosslinked polymeric ionic liquid-based sorbent coatings in direct-immersion solid-phase microextraction and high-performance liquid … I Pacheco-Fernandez, A Najafi, V Pino, JL Anderson, JH Ayala, ... Talanta 158, 125-133, 2016 | 68 | 2016 |
| Cancer systems biology and modeling: microscopic scale and multiscale approaches A Masoudi-Nejad, G Bidkhori, SH Ashtiani, A Najafi, JH Bozorgmehr, ... Seminars in cancer biology 30, 60-69, 2015 | 61 | 2015 |
| Immunoinformatic design of a COVID-19 subunit vaccine using entire structural immunogenic epitopes of SARS-CoV-2 E Behmard, B Soleymani, A Najafi, E Barzegari Scientific reports 10 (1), 20864, 2020 | 57 | 2020 |
| The effect of theophylline on acetic acid induced ulcerative colitis in rats M Ghasemi-Pirbaluti, E Motaghi, A Najafi, MJ Hosseini Biomedicine & Pharmacotherapy 90, 153-159, 2017 | 51 | 2017 |
| Molecular epidemiology of hepatitis C virus among injection drug users in Iran: a slight change in prevalence of HCV genotypes over time K Samimi-Rad, M Nasiri Toosi, A Masoudi-Nejad, A Najafi, R Rahimnia, ... Archives of virology 157, 1959-1965, 2012 | 51 | 2012 |
| A contemporary review on the important role of in silico approaches for managing different aspects of COVID-19 crisis M Moradi, R Golmohammadi, A Najafi, MM Moghaddam, ... Informatics in Medicine Unlocked 28, 100862, 2022 | 50 | 2022 |
| DNA microarray for rapid detection and identification of food and water borne bacteria: from dry to wet lab R Ranjbar, P Behzadi, A Najafi, R Roudi The open microbiology journal 11, 330, 2017 | 50 | 2017 |
| mRNA–miRNA bipartite network reconstruction to predict prognostic module biomarkers in colorectal cancer stage differentiation H Motieghader, M Kouhsar, A Najafi, B Sadeghi, A Masoudi-Nejad Molecular BioSystems 13 (10), 2168-2180, 2017 | 49 | 2017 |
| Genome scale modeling in systems biology: algorithms and resources A Najafi, G Bidkhori, J H. Bozorgmehr, I Koch, A Masoudi-Nejad Current genomics 15 (2), 130-159, 2014 | 49 | 2014 |
| Computational approach to analyze isolated ssDNA aptamers against angiotensin II M Heiat, A Najafi, R Ranjbar, AM Latifi, MJ Rasaee Journal of biotechnology 230, 34-39, 2016 | 47 | 2016 |
| Identification of direct target genes of miR-7, miR-9, miR-96, and miR-182 in the human breast cancer cell lines MCF-7 and MDA-MB-231 H Moazzeni, A Najafi, M Khani Molecular and cellular probes 34, 45-52, 2017 | 46 | 2017 |
| Bacterial CRISPR regions: general features and their potential for epidemiological molecular typing studies Z Karimi, A Ahmadi, A Najafi, R Ranjbar The open microbiology journal 12, 59, 2018 | 45 | 2018 |
| Microarray long oligo probe designing for Escherichia coli: an in-silico DNA marker extraction P Behzadi, A Najafi, E Behzadi, R Ranjbar Central European journal of urology 69 (1), 105, 2016 | 44 | 2016 |
| Identification of biomarkers in common chronic lung diseases by co-expression networks and drug-target interactions analysis M Maghsoudloo, S Azimzadeh Jamalkandi, A Najafi, A Masoudi-Nejad Molecular Medicine 26, 1-19, 2020 | 43 | 2020 |
| Simultaneous detection of Mycoplasma pneumoniae, Mycoplasma hominis and Mycoplasma arthritidis in synovial fluid of patients with rheumatoid arthritis by multiplex PCR RA Ataee, R Golmohammadi, GH Alishiri, R Mirnejad, A Najafi, ... ARCHIVES OF IRANIAN MEDICINE 18 (6), 345-350, 2015 | 43 | 2015 |
| GelClust: a software tool for gel electrophoresis images analysis and dendrogram generation S Khakabimamaghani, A Najafi, R Ranjbar, M Raam Computer methods and programs in biomedicine 111 (2), 512-518, 2013 | 40 | 2013 |
Ali Masoudi-Nejad, ProfessorLaboratory of Systems Biology and Bioinformatics (LBB), University of TehranVerified email at ut.ac.ir
