| The biochemical basis of microRNA targeting efficacy SE McGeary, KS Lin, CY Shi, TM Pham, N Bisaria, GM Kelley, DP Bartel Science 366 (6472), eaav1741, 2019 | 767 | 2019 |
| RNA circularization diminishes immunogenicity and can extend translation duration in vivo RA Wesselhoeft, PS Kowalski, FC Parker-Hale, Y Huang, N Bisaria, ... Molecular cell 74 (3), 508-520. e4, 2019 | 266 | 2019 |
| High-throughput investigation of diverse junction elements in RNA tertiary folding SK Denny, N Bisaria, JD Yesselman, R Das, D Herschlag, WJ Greenleaf Cell 174 (2), 377-390. e20, 2018 | 88 | 2018 |
| Lessons from enzyme kinetics reveal specificity principles for RNA-guided nucleases in RNA interference and CRISPR-based genome editing N Bisaria, I Jarmoskaite, D Herschlag Cell systems 4 (1), 21-29, 2017 | 87 | 2017 |
| Cation–anion interactions within the nucleic acid ion atmosphere revealed by ion counting M Gebala, GM Giambaşu, J Lipfert, N Bisaria, S Bonilla, G Li, DM York, ... Journal of the American Chemical Society 137 (46), 14705-14715, 2015 | 71 | 2015 |
| Does cation size affect occupancy and electrostatic screening of the nucleic acid ion atmosphere? M Gebala, S Bonilla, N Bisaria, D Herschlag Journal of the American Chemical Society 138 (34), 10925-10934, 2016 | 55 | 2016 |
| The story of RNA folding, as told in epochs D Herschlag, S Bonilla, N Bisaria Cold Spring Harbor perspectives in biology 10 (10), a032433, 2018 | 41 | 2018 |
| Sequence-dependent RNA helix conformational preferences predictably impact tertiary structure formation JD Yesselman, SK Denny, N Bisaria, D Herschlag, WJ Greenleaf, R Das Proceedings of the National Academy of Sciences 116 (34), 16847-16855, 2019 | 38 | 2019 |
| A New System for Comparative Functional Genomics of Saccharomyces Yeasts AA Caudy, Y Guan, Y Jia, C Hansen, C DeSevo, AP Hayes, J Agee, ... Genetics 195 (1), 275-287, 2013 | 34 | 2013 |
| MicroRNA 3′-compensatory pairing occurs through two binding modes, with affinity shaped by nucleotide identity and position SE McGeary, N Bisaria, TM Pham, PY Wang, DP Bartel Elife 11, e69803, 2022 | 32 | 2022 |
| Kinetic and thermodynamic framework for P4-P6 RNA reveals tertiary motif modularity and modulation of the folding preferred pathway N Bisaria, M Greenfeld, C Limouse, DS Pavlichin, H Mabuchi, ... Proceedings of the National Academy of Sciences 113 (34), E4956-E4965, 2016 | 27 | 2016 |
| Hidden structural modules in a cooperative RNA folding transition B Gracia, HM Al-Hashimi, N Bisaria, R Das, D Herschlag, R Russell Cell reports 22 (12), 3240-3250, 2018 | 24 | 2018 |
| Quantitative tests of a reconstitution model for RNA folding thermodynamics and kinetics N Bisaria, M Greenfeld, C Limouse, H Mabuchi, D Herschlag Proceedings of the National Academy of Sciences 114 (37), E7688-E7696, 2017 | 24 | 2017 |
| Probing the kinetic and thermodynamic consequences of the tetraloop/tetraloop receptor monovalent ion-binding site in P4–P6 RNA by smFRET N Bisaria, D Herschlag Biochemical Society Transactions 43 (2), 172-178, 2015 | 19 | 2015 |
| RNA structural modules control the rate and pathway of RNA folding and assembly B Gracia, Y Xue, N Bisaria, D Herschlag, HM Al-Hashimi, R Russell Journal of molecular biology 428 (20), 3972-3985, 2016 | 18 | 2016 |
| Roles of Long-Range Tertiary Interactions in Limiting Dynamics of the Tetrahymena Group I Ribozyme X Shi, N Bisaria, TL Benz-Moy, S Bonilla, DS Pavlichin, D Herschlag Journal of the American Chemical Society 136 (18), 6643-6648, 2014 | 17 | 2014 |
| Single-Molecule Fluorescence Reveals Commonalities and Distinctions among Natural and in Vitro-Selected RNA Tertiary Motifs in a Multistep Folding Pathway S Bonilla, C Limouse, N Bisaria, M Gebala, H Mabuchi, D Herschlag Journal of the American Chemical Society 139 (51), 18576-18589, 2017 | 16 | 2017 |
| RNA tertiary structure energetics predicted by an ensemble model of the RNA double helix JD Yesselman, SK Denny, N Bisaria, D Herschlag, WJ Greenleaf, R Das BioRxiv, 341107, 2018 | 8 | 2018 |
| Pairing to the microRNA 3′ region occurs through two alternative binding modes, with affinity shaped by nucleotide identity as well as pairing position SE McGeary, N Bisaria, DP Bartel BioRxiv, 2021.04. 13.439700, 2021 | 6 | 2021 |
| Specificity Principles in RNA-Guided Targeting N Bisaria, I Jarmoskaite, D Herschlag bioRxiv, 055954, 2016 | 2 | 2016 |
