Andreas Dräger
Andreas Dräger
Junior Professor for Computational Systems Biology of Infection and Antimicrobial-Resistance
Verified email at informatik.uni-tuebingen.de - Homepage
Title
Cited by
Cited by
Year
BiGG Models: A platform for integrating, standardizing and sharing genome-scale models
ZA King, JS Lu, A Dräger, PC Miller, S Federowicz, JA Lerman, A Ebrahim, ...
Nucleic Acids Research, 2015
5302015
Recon3D enables a three-dimensional view of gene variation in human metabolism
E Brunk, S Sahoo, DC Zielinski, A Altunkaya, A Dräger, N Mih, F Gatto, ...
Nature biotechnology 36 (3), 272-281, 2018
3012018
BioJava: an open-source framework for bioinformatics
RCG Holland, TA Down, M Pocock, A Prlić, D Huen, K James, S Foisy, ...
Bioinformatics 24 (18), 2096-2097, 2008
2832008
Controlled vocabularies and semantics in systems biology
M Courtot, N Juty, C Knüpfer, D Waltemath, A Zhukova, A Dräger, ...
Molecular systems biology 7 (1), 543, 2011
2692011
Escher: a web application for building, sharing, and embedding data-rich visualizations of biological pathways
ZA King, A Dräger, A Ebrahim, N Sonnenschein, NE Lewis, BO Palsson
PLoS computational biology 11 (8), e1004321, 2015
2322015
Encyclopedia of systems biology
W Dubitzky, O Wolkenhauer, H Yokota, KH Cho
Springer Publishing Company, Incorporated, 2013
2002013
Path2Models: large-scale generation of computational models from biochemical pathway maps
F Büchel, N Rodriguez, N Swainston, C Wrzodek, T Czauderna, R Keller, ...
BMC systems biology 7 (1), 1-19, 2013
1412013
MEMOTE for standardized genome-scale metabolic model testing
C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ...
Nature biotechnology 38 (3), 272-276, 2020
139*2020
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools
C Chaouiya, D Bérenguier, SM Keating, A Naldi, MP Van Iersel, ...
BMC systems biology 7 (1), 1-15, 2013
1382013
JSBML: a flexible Java library for working with SBML
A Dräger, N Rodriguez, M Dumousseau, A Dörr, C Wrzodek, N Le Novère, ...
Bioinformatics 27 (15), 2167-2168, 2011
1112011
Modeling metabolic networks in C. glutamicum: a comparison of rate laws in combination with various parameter optimization strategies
A Dräger, M Kronfeld, MJ Ziller, J Supper, H Planatscher, JB Magnus, ...
BMC Systems Biology 3 (1), 5, 2009
882009
COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms
M Ostaszewski, A Mazein, ME Gillespie, I Kuperstein, A Niarakis, ...
Scientific data 7 (1), 1-4, 2020
852020
KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats
C Wrzodek, A Dräger, A Zell
Bioinformatics 27 (16), 2314-2315, 2011
792011
SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks
A Dräger, N Hassis, J Supper, A Schröder, A Zell
BMC systems biology 2 (1), 39, 2008
762008
Precise generation of systems biology models from KEGG pathways
C Wrzodek, F Büchel, M Ruff, A Dräger, A Zell
BMC systems biology 7 (1), 1-12, 2013
672013
Longitudinal multi-omics analyses identify responses of megakaryocytes, erythroid cells, and plasmablasts as hallmarks of severe COVID-19
JP Bernardes, N Mishra, F Tran, T Bahmer, L Best, JI Blase, D Bordoni, ...
Immunity 53 (6), 1296-1314. e9, 2020
592020
BiGG Models 2020: multi-strain genome-scale models and expansion across the phylogenetic tree
CJ Norsigian, N Pusarla, JL McConn, JT Yurkovich, A Dräger, BO Palsson, ...
Nucleic acids research 48 (D1), D402-D406, 2020
572020
Improving collaboration by standardization efforts in systems biology
A Dräger, BØ Palsson
Frontiers in bioengineering and biotechnology 2, 61, 2014
542014
Synthetic promoters capable of driving robust nuclear gene expression in the green alga Chlamydomonas reinhardtii
MA Scranton, JT Ostrand, DR Georgianna, SM Lofgren, D Li, RC Ellis, ...
Algal research 15, 135-142, 2016
532016
Do genome‐scale models need exact solvers or clearer standards?
A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ...
Molecular systems biology 11 (10), 831, 2015
512015
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