Mahendra Mariadassou
Mahendra Mariadassou
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FROGS: find, rapidly, OTUs with galaxy solution
F Escudié, L Auer, M Bernard, M Mariadassou, L Cauquil, K Vidal, ...
Bioinformatics 34 (8), 1287-1294, 2018
Uncovering latent structure in valued graphs: a variational approach
M Mariadassou, S Robin, C Vacher
The Annals of Applied Statistics 4 (2), 715-742, 2010
Beneficial metabolic effects of selected probiotics on diet‐induced obesity and insulin resistance in mice are associated with improvement of dysbiotic gut microbiota
J Alard, V Lehrter, M Rhimi, I Mangin, V Peucelle, AL Abraham, ...
Environmental microbiology 18 (5), 1484-1497, 2016
Quantitative prediction of genome-wide resource allocation in bacteria
A Goelzer, J Muntel, V Chubukov, M Jules, E Prestel, R Nölker, ...
Metabolic engineering 32, 232-243, 2015
Gut bacteria are critical for optimal muscle function: a potential link with glucose homeostasis
K Nay, M Jollet, B Goustard, N Baati, B Vernus, M Pontones, ...
American Journal of Physiology-Endocrinology and Metabolism, 2019
Multiple comparative metagenomics using multiset k-mer counting
G Benoit, P Peterlongo, M Mariadassou, E Drezen, S Schbath, D Lavenier, ...
PeerJ Computer Science 2, e94, 2016
Phages infecting Faecalibacterium prausnitzii belong to novel viral genera that help to decipher intestinal viromes
JK Cornuault, MA Petit, M Mariadassou, L Benevides, E Moncaut, ...
Microbiome 6 (1), 1-14, 2018
Microbial ecosystems are dominated by specialist taxa
M Mariadassou, S Pichon, D Ebert
Ecology Letters 18 (9), 974-982, 2015
Inference of adaptive shifts for multivariate correlated traits
P Bastide, C Ané, S Robin, M Mariadassou
Systematic Biology 67 (4), 662-680, 2018
Variational inference for sparse network reconstruction from count data
J Chiquet, S Robin, M Mariadassou
International Conference on Machine Learning, 1162-1171, 2019
Olfactory epithelium changes in germfree mice
A François, D Grebert, M Rhimi, M Mariadassou, L Naudon, S Rabot, ...
Scientific reports 6 (1), 1-10, 2016
Variational inference for probabilistic Poisson PCA
J Chiquet, M Mariadassou, S Robin
The Annals of Applied Statistics 12 (4), 2674-2698, 2018
Local and Systemic Immune Mechanisms Underlying the Anti-Colitis Effects of the Dairy Bacterium Lactobacillus delbrueckii
C Santos Rocha, AC Gomes-Santos, T Garcias Moreira, M de Azevedo, ...
PLoS One 9 (1), e85923, 2014
Analysis of large 16S rRNA Illumina data sets: Impact of singleton read filtering on microbial community description
L Auer, M Mariadassou, M O'Donohue, C Klopp, G Hernandez‐Raquet
Molecular ecology resources 17 (6), e122-e132, 2017
Identification of proteins involved in the anti-inflammatory properties of Propionibacterium freudenreichii by means of a multi-strain study
SM Deutsch, M Mariadassou, P Nicolas, S Parayre, R Le Guellec, ...
Scientific reports 7 (1), 1-13, 2017
Convergence of the groups posterior distribution in latent or stochastic block models
M Mariadassou, C Matias
Bernoulli 21 (1), 537-573, 2015
Fructose malabsorption induces cholecystokinin expression in the ileum and cecum by changing microbiota composition and metabolism
X Zhang, A Grosfeld, E Williams, D Vasiliauskas, S Barretto, L Smith, ...
The FASEB Journal 33 (6), 7126-7142, 2019
Detection of adaptive shifts on phylogenies by using shifted stochastic processes on a tree
P Bastide, M Mariadassou, S Robin
Journal of the Royal Statistical Society: Series B (Statistical Methodology …, 2017
Comparative metatranscriptomic analysis of anaerobic digesters treating anionic surfactant contaminated wastewater
TP Delforno, TZ Macedo, C Midoux, GV Lacerda Jr, O Rué, ...
Science of the total environment 649, 482-494, 2019
Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii
V Loux, M Mariadassou, S Almeida, H Chiapello, A Hammani, J Buratti, ...
BMC genomics 16 (1), 1-19, 2015
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