| Cryptochromes interact directly with PIFs to control plant growth in limiting blue light UV Pedmale, SC Huang, M Zander, BJ Cole, J Hetzel, K Ljung, PAB Reis, ... Cell 164 (1), 233-245, 2016 | 563 | 2016 |
| Linking photoreceptor excitation to changes in plant architecture L Li, K Ljung, G Breton, RJ Schmitz, J Pruneda-Paz, C Cowing-Zitron, ... Genes & development 26 (8), 785-790, 2012 | 527 | 2012 |
| High-throughput single-cell transcriptome profiling of plant cell types CN Shulse, BJ Cole, D Ciobanu, J Lin, Y Yoshinaga, M Gouran, GM Turco, ... Cell reports 27 (7), 2241-2247. e4, 2019 | 341 | 2019 |
| Genome-wide identification of bacterial plant colonization genes BJ Cole, ME Feltcher, RJ Waters, KM Wetmore, TS Mucyn, EM Ryan, ... PLoS Biology 15 (9), e2002860, 2017 | 196 | 2017 |
| A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants R Shahan, CW Hsu, TM Nolan, BJ Cole, IW Taylor, L Greenstreet, ... Developmental cell 57 (4), 543-560. e9, 2022 | 168 | 2022 |
| Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses N Varoquaux, B Cole, C Gao, G Pierroz, CR Baker, D Patel, M Madera, ... Proceedings of the National Academy of Sciences 116 (52), 27124-27132, 2019 | 158 | 2019 |
| Subset of heat-shock transcription factors required for the early response of Arabidopsis to excess light HS Jung, PA Crisp, GM Estavillo, B Cole, F Hong, TC Mockler, BJ Pogson, ... Proceedings of the National Academy of Sciences 110 (35), 14474-14479, 2013 | 154 | 2013 |
| Plant Metabolic Network 15: A resource of genome‐wide metabolism databases for 126 plants and algae C Hawkins, D Ginzburg, K Zhao, W Dwyer, B Xue, A Xu, S Rice, B Cole, ... Journal of integrative plant biology 63 (11), 1888-1905, 2021 | 123 | 2021 |
| Molecular mechanisms driving switch behavior in xylem cell differentiation GM Turco, J Rodriguez-Medina, S Siebert, D Han, ... Cell reports 28 (2), 342-351. e4, 2019 | 92 | 2019 |
| Automated analysis of hypocotyl growth dynamics during shade avoidance in Arabidopsis B Cole, SA Kay, J Chory The Plant Journal 65 (6), 991-1000, 2011 | 88 | 2011 |
| Multilab EcoFAB study shows highly reproducible physiology and depletion of soil metabolites by a model grass J Sasse, J Kant, BJ Cole, AP Klein, B Arsova, P Schlaepfer, J Gao, ... New Phytologist 222 (2), 1149-1160, 2019 | 68 | 2019 |
| Vision, challenges and opportunities for a Plant Cell Atlas SG Jha, AT Borowsky, BJ Cole, N Fahlgren, A Farmer, SC Huang, P Karia, ... Elife 10, e66877, 2021 | 49 | 2021 |
| Daily changes in temperature, not the circadian clock, regulate growth rate in Brachypodium distachyon DA Matos, BJ Cole, IP Whitney, KJM MacKinnon, SA Kay, SP Hazen PLoS One 9 (6), e100072, 2014 | 41 | 2014 |
| Plant single-cell solutions for energy and the environment B Cole, D Bergmann, CE Blaby-Haas, IK Blaby, KE Bouchard, SM Brady, ... Communications biology 4 (1), 962, 2021 | 33 | 2021 |
| Single-cell profiling of Arabidopsis leaves to Pseudomonas syringae infection J Zhu, S Lolle, A Tang, B Guel, B Kvitko, B Cole, G Coaker Cell reports 42 (7), 2023 | 25 | 2023 |
| Alpha helical crossovers favor right‐handed supersecondary structures by kinetic trapping: The phone cord effect in protein folding BJ Cole, C Bystroff Protein Science 18 (8), 1602-1608, 2009 | 20 | 2009 |
| Successional adaptive strategies revealed by correlating arbuscular mycorrhizal fungal abundance with host plant gene expression C Gao, PE Courty, N Varoquaux, B Cole, L Montoya, L Xu, E Purdom, ... Molecular Ecology 32 (10), 2674-2687, 2023 | 18 | 2023 |
| Changes in ambient temperature are the prevailing cue in determining Brachypodium distachyon diurnal gene regulation KJM MacKinnon, BJ Cole, C Yu, JH Coomey, NT Hartwick, ... New Phytologist 227 (6), 1709-1724, 2020 | 18 | 2020 |
| Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics C Grones, T Eekhout, D Shi, M Neumann, LS Berg, Y Ke, R Shahan, ... The Plant Cell 36 (4), 812-828, 2024 | 9 | 2024 |
| Toward a data infrastructure for the Plant Cell Atlas N Fahlgren, M Kapoor, G Yordanova, I Papatheodorou, J Waese, B Cole, ... Plant Physiology 191 (1), 35-46, 2023 | 7 | 2023 |
