Carlos E. Ferreira

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André FujitaAssociate Professor, Institute of Mathematics and Statistics, University of São PauloVerified email at usp.br
João Ricardo SatoUniversidade Federal do ABC, BrazilVerified email at ufabc.edu.br
Yoshiko WakabayashiProfessor of Computer Science, University of São PauloVerified email at ime.usp.br
Cristina G. FernandesProfessor of Computer Science, University of Sao Paulo, BrazilVerified email at ime.usp.br
Cid Carvalho de SouzaInstitute of Computing - University of Campinas, BrazilVerified email at ic.unicamp.br
Flavio Keidi MiyazawaUniversity of CampinasVerified email at ic.unicamp.br
Humberto Miguel Garay MalpartidaProfessor, Escola de Artes, Ciências e Humanidades, Universidade de São PauloVerified email at usp.br
Laurence Wolsey,Professor of Applied Mathematics, University of Louvain, BelgiumVerified email at uclouvain.be
Paulo FeofiloffInstituto de Matematica e Estatistica, Universidade de Sao Paulo, BrasilVerified email at ime.usp.br
José Coelho de PinaProfessor doutor, Universidade de São PauloVerified email at ime.usp.br
Ralf BorndörferProfessor für Diskrete Mathematik, Freie Universität Berlin & Zuse-Institut BerlinVerified email at zib.de
Suely Kazue Nagahashi MarieProfessor Associado de MedicinaVerified email at usp.br
Daniel Yasumasa TakahashiFederal University of Rio Grande do NorteVerified email at neuro.ufrn.br
Eduardo MorenoGoogle Research, Universidad Adolfo IbañezVerified email at uai.cl
Vicente AcuñaUniversity of Chile, Université de Lyon, INRIAVerified email at dim.uchile.cl
Pedro Alberto MorettinProfessor of Statistics, University of São PauloVerified email at ime.usp.br
Ronaldo Fumio HashimotoAssociate Professor, University of Sao PauloVerified email at ime.usp.br
Rafael Crivellari Saliba SchoueryProfessor, Universidade Estadual de CampinasVerified email at ic.unicamp.br
Márcia R. CerioliFederal University of Rio de JaneiroVerified email at cos.ufrj.br
Fabio Prates MachadoUniversidade de São PauloVerified email at ime.usp.br

Carlos E. Ferreira

University of São Paulo

Verified email at ime.usp.br

Computer Science Combinatorial Optimization Algorithms Computational Biology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Evaluating different methods of microarray data normalization A Fujita, JR Sato, LO Rodrigues, CE Ferreira, MC Sogayar BMC bioinformatics 7, 1-11, 2006	302	2006
Modeling gene expression regulatory networks with the sparse vector autoregressive model A Fujita, JR Sato, HM Garay-Malpartida, R Yamaguchi, S Miyano, ... BMC systems biology 1, 1-11, 2007	199	2007
The node capacitated graph partitioning problem: a computational study CE Ferreira, A Martin, CC De Souza, R Weismantel, LA Wolsey Mathematical Programming 81 (2), 229-256, 1998	156	1998
Dicoogle-an open source peer-to-peer PACS C Costa, C Ferreira, L Bastião, L Ribeiro, A Silva, JL Oliveira Journal of digital imaging 24, 848-856, 2011	137	2011
Formulations and valid inequalities for the node capacitated graph partitioning problem CE Ferreira, A Martin, CC de Souza, R Weismantel, LA Wolsey Mathematical Programming 74, 247-266, 1996	121	1996
Solving multiple knapsack problems by cutting planes CE Ferreira, A Martin, R Weismantel SIAM Journal on Optimization 6 (3), 858-877, 1996	102	1996
Decomposing matrices into blocks R Borndörfer, CE Ferreira, A Martin SIAM Journal on optimization 9 (1), 236-269, 1998	98	1998
Time-varying modeling of gene expression regulatory networks using the wavelet dynamic vector autoregressive method A Fujita, JR Sato, HM Garay-Malpartida, PA Morettin, MC Sogayar, ... Bioinformatics 23 (13), 1623-1630, 2007	94	2007
Identification of COL6A1 as a differentially expressed gene in human astrocytomas A Fujita, JR Sato, F Festa, LR Gomes, SM Oba-Shinjo, SK Marie, ... Genet Mol Res 7 (2), 371-378, 2008	86	2008
Comparing Pearson, Spearman and Hoeffding's D measure for gene expression association analysis A Fujita, JR Sato, MAA Demasi, MC Sogayar, CE Ferreira, S Miyano Journal of bioinformatics and computational biology 7 (04), 663-684, 2009	78	2009
Discriminating different classes of biological networks by analyzing the graphs spectra distribution DY Takahashi, JR Sato, CE Ferreira, A Fujita PloS one 7 (12), e49949, 2012	69	2012
BOCA: um sistema de apoio a competições de programação CP de Campos, CE Ferreira Workshop de Educação em Computação, 2004	62	2004
Measurements of pVT, viscosity, and surface tension of trihexyltetradecylphosphonium tris (pentafluoroethyl) trifluorophosphate ionic liquid and modelling with equations of state CE Ferreira, NMC Talavera-Prieto, IMA Fonseca, ATG Portugal, ... The Journal of Chemical Thermodynamics 47, 183-196, 2012	51	2012
Packing squares into squares CE Ferreira, FK Miyazawa, Y Wakabayashi Pesquisa Operacional 19 (2), 223-237, 1999	47	1999
Repetition-free longest common subsequence SS Adi, MDV Braga, CG Fernandes, CE Ferreira, FV Martinez, MF Sagot, ... Discrete Applied Mathematics 158 (12), 1315-1324, 2010	44	2010
Combinatória poliédrica e planos-de-corte faciais CE Ferreira, Y Wakabayashi UNICAMP-Instituto de Computacao, 1996	43	1996
Primal-dual approximation algorithms for the prize-collecting Steiner tree problem P Feofiloff, CG Fernandes, CE Ferreira, JC de Pina Information Processing Letters 103 (5), 195-202, 2007	39	2007
Modeling nonlinear gene regulatory networks from time series gene expression data A Fujita, JR Sato, HM Garay-Malpartida, MC Sogayar, CE Ferreira, ... Journal of bioinformatics and computational biology 6 (05), 961-979, 2008	34	2008
A combinatorial optimization technique for the sequential decomposition of erosions and dilations RF Hashimoto, J Barrera, CE Ferreira Journal of Mathematical Imaging and Vision 13 (1), 17-33, 2000	26	2000
Rearrangement of DNA fragments: a branch-and-cut algorithm CE Ferreira, CC de Souza, Y Wakabayashi Discrete applied mathematics 116 (1), 161-177, 2002	23	2002

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