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Manu Kumar Gundappa
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Harnessing genomics to fast-track genetic improvement in aquaculture
RD Houston, TP Bean, DJ Macqueen, MK Gundappa, YH Jin, TL Jenkins, ...
Nature Reviews Genetics 21 (7), 389-409, 2020
3452020
Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification
FM Robertson, MK Gundappa, F Grammes, TR Hvidsten, AK Redmond, ...
Genome biology 18, 1-14, 2017
1632017
The structural variation landscape in 492 Atlantic salmon genomes
AC Bertolotti, RM Layer, MK Gundappa, MD Gallagher, E Pehlivanoglu, ...
Nature Communications 11 (1), 5176, 2020
792020
Comparative regulomics supports pervasive selection on gene dosage following whole genome duplication
GB Gillard, L Grønvold, LL Røsæg, MM Holen, Ø Monsen, BF Koop, ...
Genome Biology 22, 1-18, 2021
64*2021
Genome-wide reconstruction of rediploidization following autopolyploidization across one hundred million years of salmonid evolution
MK Gundappa, TH To, L Grønvold, SAM Martin, S Lien, J Geist, ...
Molecular biology and evolution 39 (1), msab310, 2022
312022
An insight into piscidins: The discovery, modulation and bioactivity of greater amberjack, Seriola dumerili, piscidin
DJ Milne, Á Fernández-Montero, MK Gundappa, T Wang, F Acosta, ...
Molecular immunology 114, 378-388, 2019
172019
Independent rediploidization masks shared whole genome duplication in the sturgeon-paddlefish ancestor
AK Redmond, D Casey, MK Gundappa, DJ Macqueen, A McLysaght
Nature Communications 14 (1), 2879, 2023
15*2023
Chromosome‐level reference genome for European flat oyster (Ostrea edulis L.)
MK Gundappa, C Peñaloza, T Regan, I Boutet, A Tanguy, RD Houston, ...
Evolutionary applications 15 (11), 1713-1729, 2022
142022
SalMotifDB: a tool for analyzing putative transcription factor binding sites in salmonid genomes
TD Mulugeta, T Nome, TH To, MK Gundappa, DJ Macqueen, DI Våge, ...
BMC genomics 20, 1-8, 2019
122019
A single genomic region involving a putative chromosome rearrangement in flat oyster (Ostrea edulis) is associated with differential host resilience to the parasite Bonamia ostreae
IM Sambade, A Casanova, A Blanco, MK Gundappa, TP Bean, ...
Evolutionary applications 15 (9), 1408-1422, 2022
102022
Genome-wide association and genomic prediction of growth traits in the European flat oyster (Ostrea edulis)
C Peñaloza, A Barria, A Papadopoulou, C Hooper, J Preston, M Green, ...
Frontiers in Genetics, 1751, 2022
82022
Exploration of the nurse shark (Ginglymostoma cirratum) plasma immunoproteome using high-resolution LC-MS/MS
FK Bakke, MK Gundappa, H Matz, DA Stead, DJ Macqueen, H Dooley
Frontiers in Immunology, 1964, 2022
52022
Evolution of ray-finned fish genomes: Status and directions with a primer on microRNA characterization
RS Taylor, RR Daniels, DP Morata, MK Gundappa, DJ Macqueen
Cellular and Molecular Approaches in Fish Biology, 309-346, 2022
42022
Zebrafish as a Model to Unveil the Pro-Osteogenic Effects of Boron-Vitamin D3 Synergism
JM Sojan, MK Gundappa, A Carletti, V Gaspar, P Gavaia, F Maradonna, ...
Frontiers in Nutrition 9, 868805, 2022
32022
Conserved and divergent arms of the antiviral response in the duplicated genomes of salmonid fishes
TC Clark, S Naseer, MK Gundappa, A Laurent, A Perquis, B Collet, ...
Genomics 115 (4), 110663, 2023
22023
Two parallel chromosome‐level reference genomes to support restoration and aquaculture of European flat oyster Ostrea edulis
TP Bean, A Tanguy, C Peñaloza, MK Gundappa, I Boutet, RD Houston, ...
Evolutionary Applications 15 (11), 1709-1712, 2022
22022
Genomic Epidemiology of Salmonid Alphavirus in Norwegian Aquaculture Reveals Recent Subtype-2 Transmission Dynamics and Novel Subtype-3 Lineages
DJ Macqueen, O Eve, MK Gundappa, RR Daniels, MD Gallagher, ...
Viruses 13 (12), 2549, 2021
22021
High performance imputation of structural and single nucleotide variants in Atlantic salmon using low-coverage whole genome sequencing
MK Gundappa, D Robledo, A Hamilton, RD Houston, J Prendergast, ...
bioRxiv, 2023.03. 05.531147, 2023
2023
SYNERGISTIC ACTION OF BORON WITH VITAMIN D3 ON THE EARLY-STAGE SKELETAL DEVELOPMENT IN ZEBRAFISH LARVAE
JM Sojan, MK Gundappa, F Maradonna, O Carnevali
Aquaculture 2021, 2021
2021
Validation and mapping of flat oyster genetic markers associated with the Bonamia ostreae status following a population genomics approach
I Martinez, A Chiclan, AB Garcia, M Gundappa, T Bean, DJ Macqueen, ...
NORA 4 Reconnecting across Europe, -, 2021
2021
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