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Luca Parca
Luca Parca
Agenzia Spaziale Italiana
Verified email at asi.it
Title
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Cited by
Year
In situ structural analysis of the human nuclear pore complex
A Von Appen, J Kosinski, L Sparks, A Ori, AL DiGuilio, B Vollmer, ...
Nature 526 (7571), 140-143, 2015
3952015
Deciphering a global network of functionally associated post‐translational modifications
P Minguez, L Parca, F Diella, DR Mende, R Kumar, M Helmer‐Citterich, ...
Molecular systems biology 8 (1), 599, 2012
2722012
PTMcode: a database of known and predicted functional associations between post-translational modifications in proteins
P Minguez, I Letunic, L Parca, P Bork
Nucleic acids research 41 (D1), D306-D311, 2012
1452012
PTMcode v2: a resource for functional associations of post-translational modifications within and between proteins
P Minguez, I Letunic, L Parca, L Garcia-Alonso, J Dopazo, ...
Nucleic acids research 43 (D1), D494-D502, 2015
1052015
Spatiotemporal variation of mammalian protein complex stoichiometries
A Ori, M Iskar, K Buczak, P Kastritis, L Parca, A Andrés-Pons, S Singer, ...
Genome biology 17, 1-15, 2016
1042016
Spatial tissue proteomics quantifies inter-and intratumor heterogeneity in hepatocellular carcinoma (HCC)
K Buczak, A Ori, JM Kirkpatrick, K Holzer, D Dauch, S Roessler, V Endris, ...
Molecular & Cellular Proteomics 17 (4), 810-825, 2018
792018
PDBe-KB: a community-driven resource for structural and functional annotations
M Varadi, J Berrisford, M Deshpande, SS Nair, A Gutmanas, D Armstrong, ...
Nucleic Acids Research 48 (D1), D344-D353, 2020
752020
Modeling cancer drug response through drug-specific informative genes
L Parca, G Pepe, M Pietrosanto, G Galvan, L Galli, A Palmeri, ...
Scientific reports 9 (1), 15222, 2019
542019
Systematic identification of phosphorylation-mediated protein interaction switches
MJ Betts, O Wichmann, M Utz, T Andre, E Petsalaki, P Minguez, L Parca, ...
PLoS computational biology 13 (3), e1005462, 2017
492017
MicroRNAs and long non-coding RNAs as potential candidates to target specific motifs of SARS-CoV-2
L Natarelli, L Parca, T Mazza, C Weber, F Virgili, D Fratantonio
Non-coding RNA 7 (1), 14, 2021
372021
Histone Deacetylase Inhibitors (HDACi) Cause the Selective Depletion of Bromodomain Containing Proteins (BCPs)*[S]
MT Mackmull, M Iskar, L Parca, S Singer, P Bork, A Ori, M Beck
Molecular & Cellular Proteomics 14 (5), 1350-1360, 2015
342015
MitImpact 3: modeling the residue interaction network of the Respiratory Chain subunits
S Castellana, T Biagini, F Petrizzelli, L Parca, N Panzironi, V Caputo, ...
Nucleic acids research 49 (D1), D1282-D1288, 2021
212021
Phosphate binding sites identification in protein structures
L Parca, PF Gherardini, M Helmer-Citterich, G Ausiello
Nucleic acids research 39 (4), 1231-1242, 2011
212011
Discovering sequence and structure landscapes in RNA interaction motifs
M Adinolfi, M Pietrosanto, L Parca, G Ausiello, F Ferrè, M Helmer-Citterich
Nucleic acids research 47 (10), 4958-4969, 2019
202019
Phosfinder: a web server for the identification of phosphate-binding sites on protein structures
L Parca, I Mangone, PF Gherardini, G Ausiello, M Helmer-Citterich
Nucleic acids research 39 (suppl_2), W278-W282, 2011
162011
Kinome-wide identification of phosphorylation networks in eukaryotic proteomes
L Parca, B Ariano, A Cabibbo, M Paoletti, A Tamburrini, A Palmeri, ...
Bioinformatics 35 (3), 372-379, 2019
142019
Mapping protein carboxymethylation sites provides insights into their role in proteostasis and cell proliferation
S Di Sanzo, K Spengler, A Leheis, JM Kirkpatrick, TL Rändler, ...
Nature Communications 12 (1), 6743, 2021
13*2021
Quantifying compartment‐associated variations of protein abundance in proteomics data
L Parca, M Beck, P Bork, A Ori
Molecular Systems Biology 14 (7), e8131, 2018
132018
Pyntacle: a parallel computing-enabled framework for large-scale network biology analysis
L Parca, M Truglio, T Biagini, S Castellana, F Petrizzelli, D Capocefalo, ...
GigaScience 9 (10), giaa115, 2020
122020
Nucleos: a web server for the identification of nucleotide-binding sites in protein structures
L Parca, F Ferre, G Ausiello, M Helmer-Citterich
Nucleic Acids Research 41 (W1), W281-W285, 2013
112013
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Articles 1–20