Magnus Fontes
Magnus Fontes
Professor of Mathematics, Lund University, Visiting professor Institut Pasteur, Paris
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Cited by
Microarray-based classification of a consecutive series of 121 childhood acute leukemias: prediction of leukemic and genetic subtype as well as of minimal residual disease status
A Andersson, C Ritz, D Lindgren, P Edén, C Lassen, J Heldrup, ...
Leukemia 21 (6), 1198-1203, 2007
Identification of ETV6-RUNX1-like and DUX4-rearranged subtypes in paediatric B-cell precursor acute lymphoblastic leukaemia
H Lilljebjörn, R Henningsson, A Hyrenius-Wittsten, L Olsson, ...
Nature communications 7 (1), 1-13, 2016
Autoantibodies neutralizing type I IFNs are present in~ 4% of uninfected individuals over 70 years old and account for~ 20% of COVID-19 deaths
P Bastard, A Gervais, T Le Voyer, J Rosain, Q Philippot, J Manry, ...
Science immunology 6 (62), eabl4340, 2021
Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors
E Patin, M Hasan, J Bergstedt, V Rouilly, V Libri, A Urrutia, C Alanio, ...
Nature immunology 19 (3), 302-314, 2018
Distinctive roles of age, sex, and genetics in shaping transcriptional variation of human immune responses to microbial challenges
B Piasecka, D Duffy, A Urrutia, H Quach, E Patin, C Posseme, J Bergstedt, ...
Proceedings of the National Academy of Sciences 115 (3), E488-E497, 2018
Transcriptional regulation of aquaporins in accessions of Arabidopsis in response to drought stress
E Alexandersson, JÅH Danielson, J Råde, VK Moparthi, M Fontes, ...
The Plant Journal 61 (4), 650-660, 2010
Molecular signatures in childhood acute leukemia and their correlations to expression patterns in normal hematopoietic subpopulations
A Andersson, T Olofsson, D Lindgren, B Nilsson, C Ritz, P Edén, ...
Proceedings of the National Academy of Sciences 102 (52), 19069-19074, 2005
Group selection and contribution of minority variants during virus adaptation determines virus fitness and phenotype
AV Bordería, O Isakov, G Moratorio, R Henningsson, S Agüera-González, ...
PLoS pathogens 11 (5), e1004838, 2015
Whole-genome sequencing analysis from the chikungunya virus Caribbean outbreak reveals novel evolutionary genomic elements
KA Stapleford, G Moratorio, R Henningsson, R Chen, S Matheus, ...
PLoS neglected tropical diseases 10 (1), e0004402, 2016
Gene expression profiling of leukemic cell lines reveals conserved molecular signatures among subtypes with specific genetic aberrations
A Andersson, P Edén, D Lindgren, J Nilsson, C Lassen, J Heldrup, ...
Leukemia 19 (6), 1042-1050, 2005
Early changes in the hypothalamic region in prodromal Huntington disease revealed by MRI analysis
C Soneson, M Fontes, Y Zhou, V Denisov, JS Paulsen, D Kirik, Å Petersén, ...
Neurobiology of disease 40 (3), 531-543, 2010
Integrative analysis of gene expression and copy number alterations using canonical correlation analysis
C Soneson, H Lilljebjörn, T Fioretos, M Fontes
BMC bioinformatics 11 (1), 1-20, 2010
Attenuation of RNA viruses by redirecting their evolution in sequence space
G Moratorio, R Henningsson, C Barbezange, L Carrau, AV Bordería, ...
Nature microbiology 2 (8), 1-12, 2017
The correlation pattern of acquired copy number changes in 164 ETV6/RUNX1-positive childhood acute lymphoblastic leukemias
H Lilljebjörn, C Soneson, A Andersson, J Heldrup, M Behrendtz, ...
Human molecular genetics 19 (16), 3150-3158, 2010
Standardized whole-blood transcriptional profiling enables the deconvolution of complex induced immune responses
A Urrutia, D Duffy, V Rouilly, C Posseme, R Djebali, G Illanes, V Libri, ...
Cell reports 16 (10), 2777-2791, 2016
Machine learning can identify newly diagnosed patients with CLL at high risk of infection
R Agius, C Brieghel, MA Andersen, AT Pearson, B Ledergerber, ...
Nature communications 11 (1), 1-17, 2020
Approximate geodesic distances reveal biologically relevant structures in microarray data
J Nilsson, T Fioretos, M Höglund, M Fontes
Bioinformatics 20 (6), 874-880, 2004
Sex differences in IL-17 contribute to chronicity in male versus female urinary tract infection
AZ Scharff, M Rousseau, LL Mariano, T Canton, CR Consiglio, ML Albert, ...
JCI insight 4 (13), 2019
Increasing clinical severity during a dengue virus type 3 Cuban epidemic: deep sequencing of evolving viral populations
R Rodriguez-Roche, H Blanc, AV Bordería, G Díaz, R Henningsson, ...
Journal of virology 90 (9), 4320-4333, 2016
The projection score-an evaluation criterion for variable subset selection in PCA visualization
M Fontes, C Soneson
BMC bioinformatics 12 (1), 1-17, 2011
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