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Madhavi Tippani
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Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
KR Maynard, L Collado-Torres, LM Weber, C Uytingco, BK Barry, ...
Nature neuroscience 24 (3), 425-436, 2021
1902021
Single-nucleus transcriptome analysis reveals cell-type-specific molecular signatures across reward circuitry in the human brain
MN Tran, KR Maynard, A Spangler, LA Huuki, KD Montgomery, ...
Neuron 109 (19), 3088-3103. e5, 2021
392021
dotdotdot: an automated approach to quantify multiplex single molecule fluorescent in situ hybridization (smFISH) images in complex tissues
KR Maynard, M Tippani, Y Takahashi, BDN Phan, TM Hyde, AE Jaffe, ...
Nucleic acids research 48 (11), e66-e66, 2020
392020
Assessment of corneal stromal remodeling and regeneration after photorefractive keratectomy
PB Kivanany, KC Grose, M Tippani, S Su, WM Petroll
Scientific reports 8 (1), 1-14, 2018
222018
Electrophysiological measures from human iPSC-derived neurons are associated with schizophrenia clinical status and predict individual cognitive performance
SC Page, SR Sripathy, F Farinelli, Z Ye, Y Wang, DJ Hiler, EA Pattie, ...
Proceedings of the National Academy of Sciences 119 (3), e2109395119, 2022
132022
Single molecule in situ hybridization reveals distinct localizations of schizophrenia risk-related transcripts SNX19 and AS3MT in human brain
Y Takahashi, KR Maynard, M Tippani, AE Jaffe, K Martinowich, ...
Molecular psychiatry 26 (7), 3536-3547, 2021
42021
SUFI: An automated approach to spectral unmixing of fluorescent multiplex images captured in mouse and postmortem human brain tissues
V Sadashivaiah, M Tippani, SC Page, SH Kwon, SV Bach, RA Bharadwaj, ...
bioRxiv, 2021
22021
VistoSeg: a MATLAB pipeline to process, analyze and visualize high resolution histology images for Visium spatial transcriptomics data
M Tippani, HR Divecha, JL Catallini II, LM Weber, A Spangler, AE Jaffe, ...
bioRxiv, 2021
1*2021
CaPTure: Calcium Peak Toolbox for analysis of in vitro calcium imaging data
M Tippani, EA Pattie, BA Davis, CV Nguyen, Y Wang, SR Sripathy, ...
bioRxiv, 2021
12021
The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics
LM Weber, HR Divecha, MN Tran, SH Kwon, A Spangler, KD Montgomery, ...
bioRxiv, 2022
2022
P89. Spatial Landscape of Gene Expression in the Human Locus Coeruleus
HR Divecha, LM Weber, SH Kwon, MN Tran, M Tippani, A Spangler, ...
Biological Psychiatry 91 (9), S123, 2022
2022
Multi-Omic Approaches for Spatial and Pathological Registration of Gene Expression in Human Cortex
SH Kwon, M Tippani, A Spangler, H Divecha, K Montgomery, C Bruce, ...
Biological Psychiatry 91 (9), S85-S86, 2022
2022
Induction of Bdnf from promoter I following electroconvulsive seizures contributes to structural plasticity in neurons of the piriform cortex
AD Ramnauth, KR Maynard, AS Kardian, BDN Phan, M Tippani, ...
Brain Stimulation 15 (2), 427-433, 2022
2022
TH71. ELECTROPHYSIOLOGICAL MEASURES FROM HUMAN IPSC-DERIVED NEURONS ARE ASSOCIATED WITH SCHIZOPHRENIA CLINICAL STATUS AND PREDICT INDIVIDUAL COGNITIVE PERFORMANCE
SC Page, SR Sripathy, F Farinelli, Z Ye, Y Wang, E Pattie, C Nguyen, ...
European Neuropsychopharmacology 51, e232-e233, 2021
2021
Orchestrating Spatially-Resolved Transcriptomics Analysis with Bioconductor
SCH Lukas M. Weber, Abby Spangler, Madhavi Tippani, Leonardo Collado-Torres
2021
VistoSeg: Visium Histology Image Segmentation and Processing Pipeline
M Tippani
2021
Developing And Assessing Methods For Calcium Imaging Data
J Catallini
Johns Hopkins University, 2020
2020
Spatial Gene Expression at Single Cell Resolution in Mouse and Postmortem Human Brain
K Maynard, M Tippani, Y Takahashi, Z Besich, D Weinberger, T Hyde, ...
NEUROPSYCHOPHARMACOLOGY 44 (SUPPL 1), 181-182, 2019
2019
In Situ Visualization and Quantification of Transcripts Associated With Risk for Psychiatric Disease in Postmortem Human Brain Tissue
K Maynard, Y Takahashi, M Tippani, A Jaffe, D Weinberger, T Hyde, ...
NEUROPSYCHOPHARMACOLOGY 43, S340-S340, 2018
2018
Interactive Analytical Tool for Quantitative Corneal Confocal Imaging in vivo
M Tippani
2016
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Articles 1–20