| Applied combinatorics on words M Lothaire Cambridge Univ Pr, 2005 | 640 | 2005 |
| WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads M Patterson, T Marschall, N Pisanti, L Van Iersel, L Stougie, GW Klau, ... Journal of Computational Biology 22 (6), 498-509, 2015 | 407 | 2015 |
| Computational pan-genomics: status, promises and challenges Briefings in Bioinformatics, 2016 | 373* | 2016 |
| WhatsHap: fast and accurate read-based phasing M Martin, M Patterson, S Garg, S O Fischer, N Pisanti, GW Klau, ... BioRxiv, 085050, 2016 | 343 | 2016 |
| RISOTTO: Fast Extraction of Motifs with Mismatches N Pisanti, AM Carvalho, L Marsan, MF Sagot LATIN 2006: Theoretical Informatics: 7th Latin American Symposium, Valdivia …, 2006 | 139 | 2006 |
| Optimal listing of cycles and st-paths in undirected graphs E Birmelé, R Ferreira, R Grossi, A Marino, N Pisanti, R Rizzi, G Sacomoto Proceedings of the twenty-fourth annual ACM-SIAM symposium on Discrete …, 2013 | 122 | 2013 |
| Bases of motifs for generating repeated patterns with wild cards N Pisanti, M Crochemore, R Grossi, MF Sagot IEEE/ACM Transactions on Computational Biology and Bioinformatics 2 (1), 40-50, 2005 | 85 | 2005 |
| Identifying SNPs without a reference genome by comparing raw reads P Peterlongo, N Schnel, N Pisanti, MF Sagot, V Lacroix String Processing and Information Retrieval: 17th International Symposium …, 2010 | 58 | 2010 |
| HapCol: accurate and memory-efficient haplotype assembly from long reads Y Pirola, S Zaccaria, R Dondi, GW Klau, N Pisanti, P Bonizzoni Bioinformatics 32 (11), 1610-1617, 2016 | 57 | 2016 |
| A basis of tiling motifs for generating repeated patterns and its complexity for higher quorum N Pisanti, M Crochemore, R Grossi, MF Sagot Mathematical Foundations of Computer Science 2003: 28th International …, 2003 | 50 | 2003 |
| On-line pattern matching on similar texts R Grossi, CS Iliopoulos, C Liu, N Pisanti, SP Pissis, A Retha, G Rosone, ... 28th Annual Symposium on Combinatorial Pattern Matching (CPM 2017), 9: 1-9: 14, 2017 | 47 | 2017 |
| WhatsHap: Haplotype Assembly for Future-Generation Sequencing Reads M Patterson, T Marschall, N Pisanti, L van Iersel, L Stougie, GW Klau, ... Research in Computational Molecular Biology: 18th Annual International …, 2014 | 45 | 2014 |
| On the minimum error correction problem for haplotype assembly in diploid and polyploid genomes P Bonizzoni, R Dondi, GW Klau, Y Pirola, N Pisanti, S Zaccaria Journal of Computational Biology 23 (9), 718-736, 2016 | 41 | 2016 |
| A first approach to finding common motifs with gaps CS Iliopoulos, J McHugh, P Peterlongo, N Pisanti, W Rytter, MF Sagot International Journal of Foundations of Computer Science 16 (06), 1145-1154, 2005 | 37 | 2005 |
| Even faster elastic-degenerate string matching via fast matrix multiplication G Bernardini, P Gawrychowski, N Pisanti, SP Pissis, G Rosone 46th International Colloquium on Automata, Languages, and Programming (ICALP …, 2019 | 36 | 2019 |
| Circular sequence comparison: algorithms and applications R Grossi, CS Iliopoulos, R Mercas, N Pisanti, SP Pissis, A Retha, F Vayani Algorithms for Molecular Biology 11, 1-14, 2016 | 35 | 2016 |
| Lossless filter for multiple repetitions with Hamming distance P Peterlongo, N Pisanti, F Boyer, AP Do Lago, MF Sagot Journal of Discrete Algorithms 6 (3), 497-509, 2008 | 31 | 2008 |
| SNPs detection by eBWT positional clustering N Prezza, N Pisanti, M Sciortino, G Rosone Algorithms for Molecular Biology 14, 1-13, 2019 | 30 | 2019 |
| Lossless filter for multiple repeats with bounded edit distance P Peterlongo, GAT Sacomoto, AP Do Lago, N Pisanti, MF Sagot Algorithms for Molecular Biology 4, 1-20, 2009 | 29 | 2009 |
| Approximate pattern matching on elastic-degenerate text G Bernardini, N Pisanti, SP Pissis, G Rosone Theoretical Computer Science 812, 109-122, 2020 | 28 | 2020 |
Roberto GrossiProfessor of Computer Science, University of Pisa, ItalyVerified email at unipi.it
