| MAPseq: highly efficient k-mer search with confidence estimates, for rRNA sequence analysis JF Matias Rodrigues, TSB Schmidt, J Tackmann, C von Mering Bioinformatics 33 (23), 3808-3810, 2017 | 104 | 2017 |
| Rapid inference of direct interactions in large-scale ecological networks from heterogeneous microbial sequencing data J Tackmann, JFM Rodrigues, C von Mering Cell systems 9 (3), 286-296. e8, 2019 | 102 | 2019 |
| Ecologically informed microbial biomarkers and accurate classification of mixed and unmixed samples in an extensive cross-study of human body sites J Tackmann, N Arora, TSB Schmidt, JFM Rodrigues, C von Mering Microbiome 6, 1-16, 2018 | 32 | 2018 |
| Fermentation ability of gut microbiota of wild Japanese macaques in the highland and lowland Yakushima: In vitro fermentation assay and genetic analyses G Hanya, J Tackmann, A Sawada, W Lee, SS Pokharel, ... Microbial ecology 80, 459-474, 2020 | 14 | 2020 |
| Reproducible propagation of species-rich soil bacterial communities suggests robust underlying deterministic principles of community formation S Čaušević, J Tackmann, V Sentchilo, C von Mering, JR van der Meer Msystems 7 (2), e00160-22, 2022 | 9 | 2022 |
| From microbiome composition to functional engineering, one step at a time SD Burz, S Causevic, A Dal Co, M Dmitrijeva, P Engel, D Garrido-Sanz, ... Microbiology and Molecular Biology Reviews 87 (4), e00063-23, 2023 | 5 | 2023 |
| A global survey of eco-evolutionary pressures acting on horizontal gene transfer M Dmitrijeva, J Tackmann, JM Rodrigues, J Huerta-Cepas, LP Coelho, ... | 2 | 2023 |
| MAPseq: improved speed, accuracy and consistency in ribosomal RNA sequence analysis JF Matias Rodrigues, TSB Schmidt, J Tackmann, C von Mering bioRxiv, 126953, 2017 | 1 | 2017 |
| A global survey of prokaryotic genomes reveals the eco-evolutionary pressures driving horizontal gene transfer M Dmitrijeva, J Tackmann, JF Matias Rodrigues, J Huerta-Cepas, ... Nature Ecology & Evolution, 1-13, 2024 | | 2024 |
| Reproducible Propagation of Species-Rich Soil Microbiomes Suggests Robust Underlying Deterministic Principles of Community Formation S Čaušević, J Tackmann, V Sentchilo, C von Mering, JR van der Meer bioRxiv, 2021.10. 29.466435, 2021 | | 2021 |
| Wiring the Microbial Web of Earth–New Approaches for Scalable Computational Prediction of Interpretable Microbial Ecosystem Structure J Tackmann University of Zurich, 2019 | | 2019 |
