|Bayesian network and nonparametric heteroscedastic regression for nonlinear modeling of genetic network|
S Imoto, S Kim, T Goto, S Aburatani, K Tashiro, S Kuhara, S Miyano
Journal of bioinformatics and computational biology 1 (02), 231-252, 2003
|Oil Accumulation by the Oleaginous Diatom Fistulifera solaris as Revealed by the Genome and Transcriptome|
T Tanaka, Y Maeda, A Veluchamy, M Tanaka, H Abida, E Maréchal, ...
The Plant Cell 27 (1), 162-176, 2015
|Use of gene networks from full genome microarray libraries to identify functionally relevant drug-affected genes and gene regulation cascades|
CJ Savoie, S Aburatani, S Watanabe, Y Eguchi, S Muta, S Imoto, ...
Dna Research 10 (1), 19-25, 2003
|Use of gene networks for identifying and validating drug targets|
S Imoto, CJ Savoie, S Aburatani, S Kim, K Tashiro, S Kuhara, S Miyano
Journal of bioinformatics and computational biology 1 (03), 459-474, 2003
|ASIAN: a web server for inferring a regulatory network framework from gene expression profiles|
S Aburatani, K Goto, S Saito, H Toh, K Horimoto
Nucleic acids research 33 (suppl_2), W659-W664, 2005
|Network evaluation from the consistency of the graph structure with the measured data|
S Saito, S Aburatani, K Horimoto
BMC systems biology 2 (1), 1-14, 2008
|Deduction of a gene regulatory relationship framework from gene expression data by the application of graphical Gaussian modeling|
S Aburatani, S Kuhara, H Toh, K Horimoto
Signal Processing 83 (4), 777-788, 2003
|Bootstrap analysis of gene networks based on Bayesian networks and nonparametric regression|
S Imoto, SY Kim, H Shimodaira, S Aburatani, K Tashiro, S Kuhara, ...
Genome Informatics 13, 369-370, 2002
|Prediction of developmental chemical toxicity based on gene networks of human embryonic stem cells|
J Yamane, S Aburatani, S Imanishi, H Akanuma, R Nagano, T Kato, ...
Nucleic acids research 44 (12), 5515-5528, 2016
|An integrated comprehensive workbench for inferring genetic networks: voyagene|
Y Maki, Y Takahashi, Y Arikawa, S Watanabe, K Aoshima, Y Eguchi, ...
Journal of bioinformatics and computational biology 2 (03), 533-550, 2004
|Discovery of novel transcription control relationships with gene regulatory networks generated from multiple-disruption full genome expression libraries|
S Aburatani, K Tashiro, CJ Savoie, M Nishizawa, K Hayashi, Y Ito, S Muta, ...
DNA research 10 (1), 1-8, 2003
|Gene expression profiling of hepatitis B-and hepatitis C-related hepatocellular carcinoma using graphical Gaussian modeling|
T Ueda, M Honda, K Horimoto, S Aburatani, S Saito, T Yamashita, Y Sakai, ...
Genomics 101 (4), 238-248, 2013
|ASIAN: a website for network inference|
S Aburatani, K Goto, S Saito, M Fumoto, A Imaizumi, N Sugaya, ...
Bioinformatics 20 (16), 2853-2856, 2004
|Application of structure equation modeling for inferring a serial transcriptional regulation in yeast|
Gene regulation and systems biology 5, GRSB. S7569, 2011
|Causes for the large genome size in a cyanobacterium Anabaena sp. PCC7120|
N Sugaya, M Sato, H Murakami, A Imaizumi, S Aburatani, K Horimoto
Genome Informatics 15 (1), 229-238, 2004
|Elucidation of the Relationships between LexA-Regulated Genes in the SOS response|
S Aburatani, K Horimoto
Genome Informatics 16 (1), 95-105, 2005
|A graphical chain model for inferring regulatory system networks from gene expression profiles|
S Aburatani, S Saito, H Toh, K Horimoto
Statistical Methodology 3 (1), 17-28, 2006
|Correlation between luminescence intensity and cytotoxicity in cell-based cytotoxicity assay using luciferase|
S Wakuri, K Yamakage, Y Kazuki, K Kazuki, M Oshimura, S Aburatani, ...
Analytical biochemistry 522, 18-29, 2017
|Network inference of pal-1 lineage-specific regulation in the C. elegans embryo by structural equation modeling|
Bioinformation 8 (14), 652, 2012
|Gene systems network inferred from expression profiles in hepatocellular carcinogenesis by graphical Gaussian model|
S Aburatani, F Sun, S Saito, M Honda, S Kaneko, K Horimoto
EURASIP Journal on Bioinformatics and Systems Biology 2007, 1-11, 2007