| The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update E Afgan, D Baker, B Batut, M Van Den Beek, D Bouvier, M Čech, J Chilton, ... Nucleic acids research 46 (W1), W537-W544, 2018 | 2459 | 2018 |
| The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update E Afgan, D Baker, M Van den Beek, D Blankenberg, D Bouvier, M Cˇech, ... Nucleic Acids Research, 2016 | 1386 | 2016 |
| The Zebrafish Information Network: the zebrafish model organism database J Sprague, L Bayraktaroglu, D Clements, T Conlin, D Fashena, K Frazer, ... Nucleic acids research 34 (suppl_1), D581-D585, 2006 | 289 | 2006 |
| Squeaky wheel optimization DE Joslin, DP Clements Journal of Artificial Intelligence Research 10, 353-373, 1999 | 280 | 1999 |
| The Zebrafish Information Network (ZFIN): the zebrafish model organism database J Sprague, D Clements, T Conlin, P Edwards, K Frazer, K Schaper, ... Nucleic acids research 31 (1), 241-243, 2003 | 143 | 2003 |
| A high-resolution anatomical ontology of the developing murine genitourinary tract MH Little, J Brennan, K Georgas, JA Davies, DR Davidson, RA Baldock, ... Gene Expression Patterns 7 (6), 680-699, 2007 | 140 | 2007 |
| Organization of the pronephric kidney revealed by large-scale gene expression mapping D Raciti, L Reggiani, L Geffers, Q Jiang, F Bacchion, AE Subrizi, ... Genome biology 9 (5), 1-21, 2008 | 101 | 2008 |
| Heuristic optimization: A hybrid AI/OR approach D Clements, J Crawford, D Joslin, G Nemhauser, M Puttlitz, ... Workshop on Industrial Constraint-Directed Scheduling, 1997 | 66 | 1997 |
| " Squeaky Wheel" Optimization DE Joslin, DP Clements AAAI/IAAI, 340-346, 1998 | 59 | 1998 |
| Cost-optimizing allocation system and method DE Joslin, DP Clements US Patent 6,272,483, 2001 | 55 | 2001 |
| Cyclic scheduling DL Draper, AK Jonsson, DP Clements, DE Joslin IJCAI, 1016-1021, 1999 | 54 | 1999 |
| Using Galaxy to Perform Large‐Scale Interactive Data Analyses J Hillman‐Jackson, D Clements, D Blankenberg, J Taylor, A Nekrutenko, ... Current protocols in bioinformatics, 10.5. 1-10.5. 47, 2012 | 53 | 2012 |
| MetaBase—the wiki-database of biological databases DM Bolser, PY Chibon, N Palopoli, S Gong, D Jacob, VDD Angel, D Swan, ... Nucleic acids research 40 (D1), D1250-D1254, 2012 | 49 | 2012 |
| Myriad: design and implementation of a federated database prototype EP Lim, SY Hwang, J Srivastava, D Clements, M Ganesh Software: Practice and Experience 25 (5), 533-562, 1995 | 39 | 1995 |
| Community-driven data analysis training for biology B Batut, S Hiltemann, A Bagnacani, D Baker, V Bhardwaj, C Blank, ... Cell systems 6 (6), 752-758. e1, 2018 | 29 | 2018 |
| The chado natural diversity module: a new generic database schema for large-scale phenotyping and genotyping data S Jung, N Menda, S Redmond, RM Buels, M Friesen, Y Bendana, ... Database 2011, 2011 | 28 | 2011 |
| Myriad: Design and implementation of a federated database prototype D Clements, M Ganesh, SY Hwang, EP Lim, K Mediratta, J Srivastava, ... Technical Report, Deparment of Computer Science, University of Minnesota …, 1994 | 17 | 1994 |
| The MYRIAD federated database prototype SY Hwang, EP Lim, HR Yang, S Musukula, K Mediratta, M Ganesh, ... ACM SIGMOD Record 23 (2), 518, 1994 | 7 | 1994 |
| A global perspective on bioinformatics training needs MD Brazas, C Brooksbank, RC Jimenez, S Blackford, PM Palagi, ... BioRXiv, 098996, 2017 | 6 | 2017 |
| The Galaxy Track Browser: Transforming the genome browser from visualization tool to analysis tool J Goecks, K Li, D Clements, J Taylor Biological Data Visualization (BioVis), 2011 IEEE Symposium on, 39-46, 2011 | 4 | 2011 |
James TaylorProfessor of Biology and Computer Science, Johns Hopkins UniversityVerified email at jhu.edu
