Mayya Sedova
Mayya Sedova
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BiologicalNetworks: visualization and analysis tool for systems biology
M Baitaluk, M Sedova, A Ray, A Gupta
Nucleic acids research 34 (suppl_2), W466-W471, 2006
PDBFlex: exploring flexibility in protein structures
T Hrabe, Z Li, M Sedova, P Rotkiewicz, L Jaroszewski, A Godzik
Nucleic acids research 44 (D1), D423-D428, 2016
BiologicalNetworks 2.0-an integrative view of genome biology data
S Kozhenkov, Y Dubinina, M Sedova, A Gupta, J Ponomarenko, ...
BMC bioinformatics 11 (1), 610, 2010
BiologicalNetworks-tools enabling the integration of multi-scale data for the host-pathogen studies
S Kozhenkov, M Sedova, Y Dubinina, A Gupta, A Ray, J Ponomarenko, ...
BMC systems biology 5 (1), 7, 2011
Camera 2.0: A data-centric metagenomics community infrastructure driven by scientific workflows
I Altintas, AW Lin, J Chen, C Churas, M Gujral, S Sun, W Li, R Manansala, ...
2010 6th World Congress on Services, 352-359, 2010
Protael: protein data visualization library for the web
M Sedova, L Jaroszewski, A Godzik
Bioinformatics 32 (4), 602-604, 2016
PubServer: literature searches by homology
L Jaroszewski, L Koska, M Sedova, A Godzik
Nucleic acids research 42 (W1), W430-W435, 2014
LUD, a new protein domain associated with lactate utilization
WC Hwang, C Bakolitsa, M Punta, PC Coggill, A Bateman, HL Axelrod, ...
BMC bioinformatics 14 (1), 1-9, 2013
Extending the data model for data-centric metagenomics analysis using scientific workflows in camera
I Altintas, J Chen, M Sedova, A Gupta, S Sun, AW Lin, M Gujral, ...
2010 Sixth IEEE International Conference on e-Science Workshops, 49-56, 2010
Coronavirus3D: 3D structural visualization of COVID-19 genomic divergence
M Sedova, L Jaroszewski, A Alisoltani, A Godzik
Bioinformatics, 2020
Cancer3D 2.0: interactive analysis of 3D patterns of cancer mutations in cancer subsets
M Sedova, M Iyer, Z Li, L Jaroszewski, KW Post, T Hrabe, E Porta-Pardo, ...
Nucleic acids research 47 (D1), D895-D899, 2019
Large scale analysis of smoking-induced changes in the tumor immune microenvironment
A Alisoltani, X Qiu, L Jaroszewski, M Sedova, Z Li, A Godzik
bioRxiv, 2020
FATCAT 2.0: towards a better understanding of the structural diversity of proteins
Z Li, L Jaroszewski, M Iyer, M Sedova, A Godzik
Nucleic Acids Research, 2020
Difference contact maps: From what to why in the analysis of the conformational flexibility of proteins
M Iyer, Z Li, L Jaroszewski, M Sedova, A Godzik
PloS one 15 (3), e0226702, 2020
The interplay of SARS-CoV-2 evolution and constraints imposed by the structure and functionality of its proteins
L Jaroszewski, M Iyer, A Alisoltani, M Sedova, A Godzik
bioRxiv, 2020
Extending the Data Model for Data-Centric Metagenomics Analysis Using Scientific Workflows in CAMERA
MK Anand, S Sun, M Gujral, A Gupta, AW Lin, W Li, M Ellisman, JS Grethe, ...
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