Lucas Paoli
Lucas Paoli
Unknown affiliation
Verified email at ethz.ch
Title
Cited by
Cited by
Year
Microbial abundance, activity and population genomic profiling with mOTUs2
A Milanese, DR Mende, L Paoli, G Salazar, HJ Ruscheweyh, M Cuenca, ...
Nature communications 10 (1), 1-11, 2019
1102019
Gene expression changes and community turnover differentially shape the global ocean metatranscriptome
G Salazar, L Paoli, A Alberti, J Huerta-Cepas, HJ Ruscheweyh, M Cuenca, ...
Cell 179 (5), 1068-1083. e21, 2019
832019
metaSNV: A tool for metagenomic strain level analysis
PI Costea, R Munch, LP Coelho, L Paoli, S Sunagawa, P Bork
PloS one 12 (7), e0182392, 2017
632017
Principles of plastid reductive evolution illuminated by nonphotosynthetic chrysophytes
RG Dorrell, T Azuma, M Nomura, GA de Kerdrel, L Paoli, S Yang, ...
Proceedings of the National Academy of Sciences 116 (14), 6914-6923, 2019
292019
Plastid transcript editing across dinoflagellate lineages shows lineage-specific application but conserved trends
CM Klinger, L Paoli, RJ Newby, MYW Wang, HD Carroll, JD Leblond, ...
Genome biology and evolution 10 (4), 1019-1038, 2018
162018
proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes
DR Mende, I Letunic, OM Maistrenko, TSB Schmidt, A Milanese, L Paoli, ...
Nucleic acids research 48 (D1), D621-D625, 2020
142020
Phylogenetic estimation of community composition and novel eukaryotic lineages in Base Mine Lake: an oil sands tailings reclamation site in northern Alberta
E Richardson, D Bass, A Smirnova, L Paoli, P Dunfield, JB Dacks
Journal of Eukaryotic Microbiology 67 (1), 86-99, 2020
82020
Ecogenomics of key prokaryotes in the arctic ocean
M Royo-Llonch, P Sánchez, C Ruiz-González, G Salazar, C Pedrós-Alió, ...
22020
Space, time and microdiversity: towards a resolution revolution in microbiomics
L Paoli, S Sunagawa
Environmental microbiology reports 13 (1), 31, 2021
12021
Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities
SG Acinas, P Sánchez, G Salazar, FM Cornejo-Castillo, M Sebastián, ...
Communications biology 4 (1), 1-15, 2021
2021
Critical Assessment of Metagenome Interpretation-the second round of challenges
F Meyer, A Fritz, ZL Deng, D Koslicki, A Gurevich, G Robertson, J Zhu, ...
bioRxiv, 2021
2021
Extended taxonomic profiling of diverse environments with mOTUs 2.6
HJ Ruscheweyh, A Milanese, L Paoli, Q Clayssen, D Mende, G Zeller, ...
bioRxiv, 2021
2021
Uncharted biosynthetic potential of the ocean microbiome
L Paoli, HJ Ruscheweyh, CC Forneris, S Kautsar, Q Clayssen, G Salazar, ...
bioRxiv, 2021
2021
Microbial eukaryotes in oilsandsassociated environments of Northern Alberta
M Aguilar, E Richardson, L Paoli, C Nesbo, J Foght, PF Dunfield, ...
Protistology 10 (2), 2016
2016
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Articles 1–14