| A human gut microbial gene catalogue established by metagenomic sequencing J Qin, R Li, J Raes, M Arumugam, KS Burgdorf, C Manichanh, T Nielsen, ... nature 464 (7285), 59-65, 2010 | 10724 | 2010 |
| Enterotypes of the human gut microbiome M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ... nature 473 (7346), 174-180, 2011 | 6550 | 2011 |
| Richness of human gut microbiome correlates with metabolic markers E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ... Nature 500 (7464), 541-546, 2013 | 3698 | 2013 |
| An integrated catalog of reference genes in the human gut microbiome J Li, H Jia, X Cai, H Zhong, Q Feng, S Sunagawa, M Arumugam, ... Nature biotechnology 32 (8), 834-841, 2014 | 1519 | 2014 |
| Differential adaptation of human gut microbiota to bariatric surgery–induced weight loss: links with metabolic and low-grade inflammation markers JP Furet, LC Kong, J Tap, C Poitou, A Basdevant, JL Bouillot, D Mariat, ... Diabetes 59 (12), 3049-3057, 2010 | 1264 | 2010 |
| Towards the human intestinal microbiota phylogenetic core J Tap, S Mondot, F Levenez, E Pelletier, C Caron, JP Furet, E Ugarte, ... Environmental microbiology 11 (10), 2574-2584, 2009 | 981 | 2009 |
| Microbial dysbiosis in colorectal cancer (CRC) patients I Sobhani, J Tap, F Roudot-Thoraval, JP Roperch, S Letulle, P Langella, ... PloS one 6 (1), e16393, 2011 | 854 | 2011 |
| Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ... Nature biotechnology 32 (8), 822-828, 2014 | 850 | 2014 |
| Potential of fecal microbiota for early‐stage detection of colorectal cancer G Zeller, J Tap, AY Voigt, S Sunagawa, JR Kultima, PI Costea, A Amiot, ... Molecular systems biology 10 (11), 766, 2014 | 790 | 2014 |
| Genomic variation landscape of the human gut microbiome S Schloissnig, M Arumugam, S Sunagawa, M Mitreva, J Tap, A Zhu, ... Nature 493 (7430), 45-50, 2013 | 785 | 2013 |
| Identification of an intestinal microbiota signature associated with severity of irritable bowel syndrome J Tap, M Derrien, H Törnblom, R Brazeilles, S Cools-Portier, J Doré, ... Gastroenterology 152 (1), 111-123. e8, 2017 | 436 | 2017 |
| Metagenomic species profiling using universal phylogenetic marker genes S Sunagawa, DR Mende, G Zeller, F Izquierdo-Carrasco, SA Berger, ... Nature methods 10 (12), 1196-1199, 2013 | 433 | 2013 |
| Comparative assessment of human and farm animal faecal microbiota using real-time quantitative PCR JP Furet, O Firmesse, M Gourmelon, C Bridonneau, J Tap, S Mondot, ... FEMS microbiology ecology 68 (3), 351-362, 2009 | 397 | 2009 |
| Gut microbiota after gastric bypass in human obesity: increased richness and associations of bacterial genera with adipose tissue genes LC Kong, J Tap, J Aron-Wisnewsky, V Pelloux, A Basdevant, JL Bouillot, ... The American journal of clinical nutrition 98 (1), 16-24, 2013 | 378 | 2013 |
| Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis P Supply, M Marceau, S Mangenot, D Roche, C Rouanet, V Khanna, ... Nature genetics 45 (2), 172-179, 2013 | 285 | 2013 |
| Gut microbiota richness promotes its stability upon increased dietary fibre intake in healthy adults J Tap, JP Furet, M Bensaada, C Philippe, H Roth, S Rabot, O Lakhdari, ... Environmental microbiology 17 (12), 4954-4964, 2015 | 279 | 2015 |
| Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes L Tasse, J Bercovici, S Pizzut-Serin, P Robe, J Tap, C Klopp, BL Cantarel, ... Genome research 20 (11), 1605-1612, 2010 | 240 | 2010 |
| Faecal microbiota study reveals specific dysbiosis in spondyloarthritis M Breban, J Tap, A Leboime, R Said-Nahal, P Langella, G Chiocchia, ... Annals of the rheumatic diseases 76 (9), 1614-1622, 2017 | 233 | 2017 |
| Functional metagenomics: a high throughput screening method to decipher microbiota-driven NF-κB modulation in the human gut O Lakhdari, A Cultrone, J Tap, K Gloux, F Bernard, SD Ehrlich, F Lefèvre, ... PloS one 5 (9), e13092, 2010 | 97 | 2010 |
| Prediction of the intestinal resistome by a three-dimensional structure-based method E Ruppé, A Ghozlane, J Tap, N Pons, AS Alvarez, N Maziers, T Cuesta, ... Nature microbiology 4 (1), 112-123, 2019 | 95 | 2019 |
Muriel DerrienGut Microbiota Research Scientist, Danone Research, Palaiseau, FranceVerified email at danone.com
