Aleksandra Swiercz
Aleksandra Swiercz
Institute of Computing Science, Poznan University of Technology
Verified email at
Cited by
Cited by
Tabu search algorithm for DNA sequencing by hybridization with isothermic libraries
J Błażewicz, P Formanowicz, M Kasprzak, WT Markiewicz, A Świercz
Computational biology and chemistry 28 (1), 11-19, 2004
Whole genome assembly from 454 sequencing output via modified DNA graph concept
J Blazewicz, M Bryja, M Figlerowicz, P Gawron, M Kasprzak, E Kirton, ...
Computational Biology and Chemistry 33 (3), 224-230, 2009
DNA sequencing by hybridization via genetic search
J Blazewicz, C Oguz, A Swiercz, J Weglarz
Operations Research 54 (6), 1185-1192, 2006
A hyper-heuristic approach to sequencing by hybridization of DNA sequences
J Blazewicz, EK Burke, G Kendall, W Mruczkiewicz, C Oguz, A Swiercz
Annals of Operations Research 207 (1), 27-41, 2013
Dealing with repetitions in sequencing by hybridization
J Blazewicz, F Glover, M Kasprzak, WT Markiewicz, C OĞuz, ...
Computational Biology and Chemistry 30 (5), 313-320, 2006
An integrated approach (cluster analysis integration method) to combine expression data and protein–protein interaction networks in agrigenomics: application on arabidopsis …
D Santoni, A Swiercz, A Żmieńko, M Kasprzak, M Blazewicz, P Bertolazzi, ...
Omics: A journal of integrative biology 18 (2), 155-165, 2014
Graph algorithms for DNA sequencing–origins, current models and the future
J Blazewicz, M Kasprzak, M Kierzynka, W Frohmberg, A Swiercz, ...
European Journal of Operational Research 264 (3), 799-812, 2018
Unified encoding for hyper-heuristics with application to bioinformatics
A Swiercz, EK Burke, M Cichenski, G Pawlak, S Petrovic, T Zurkowski, ...
Central European Journal of Operations Research 22 (3), 567-589, 2014
A gene expression microarray for Nicotiana benthamiana based on de novo transcriptome sequence assembly
M Goralski, P Sobieszczanska, A Obrepalska-Steplowska, A Swiercz, ...
Plant Methods 12 (1), 1-10, 2016
Characterization of Sus scrofa small non-coding RNAs present in both female and male gonads
D Kowalczykiewicz, A Świercz, L Handschuh, K Leśniak, M Figlerowicz, ...
PloS one 9 (11), e113249, 2014
Hyper‐Heuristics and Metaheuristics for Selected Bio‐Inspired Combinatorial Optimization Problems
A Swiercz
Heuristics and Hyper-Heuristics-Principles and Applications, 2017
DNA sequence assembly involving an acyclic graph model
J Blazewicz, W Frohmberg, P Gawron, M Kasprzak, M Kierzynka, ...
Foundations of Computing and Decision Sciences 38 (1), 25-34, 2013
Antifungal Agent 4-AN Changes the Genome-Wide Expression Profile, Downregulates Virulence-Associated Genes and Induces Necrosis in Candida albicans Cells
A Martyna, M Masłyk, M Janeczko, E Kochanowicz, B Gielniewski, ...
Molecules 25 (12), 2928, 2020
GRASShopPER—An algorithm for de novo assembly based on GPU alignments
A Swiercz, W Frohmberg, M Kierzynka, P Wojciechowski, P Zurkowski, ...
PloS one 13 (8), e0202355, 2018
Transcriptome Remodeling in Gradual Development of Inverse Resistance between Paclitaxel and Cisplatin in Ovarian Cancer Cells
J Szenajch, A Szabelska-Beręsewicz, A Świercz, J Zyprych-Walczak, ...
International journal of molecular sciences 21 (23), 9218, 2020
Characterization of RNP Networks of PUM1 and PUM2 Post-Transcriptional Regulators in TCam-2 Cells, a Human Male Germ Cell Model
MJ Smialek, E Ilaslan, MP Sajek, A Swiercz, DM Janecki, ...
Cells 9 (4), 984, 2020
MTTE: an innovative strategy for the evaluation of targeted/exome enrichment efficiency
K Klonowska, L Handschuh, A Swiercz, M Figlerowicz, P Kozlowski
Oncotarget 7 (41), 67266, 2016
Genome-scale de novo assembly using ALGA
S Swat, A Laskowski, J Badura, W Frohmberg, P Wojciechowski, ...
Bioinformatics 37 (12), 1644-1651, 2021
Parallel implementation of the novel approach to genome assembly
J Blazewicz, M Kasprzak, A Swiercz, M Figlerowicz, P Gawron, D Platt, ...
2008 Ninth ACIS International Conference on Software Engineering, Artificial …, 2008
Human PUM1 and PUM2 exhibit regulation of divergent mRNA targets in male germ cells
MJ Smialek, E Ilaslan, MP Sajek, A Swiercz, DM Janecki, ...
Biorxiv, 760967, 2019
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