| Metagenomic biomarker discovery and explanation N Segata, J Izard, L Waldron, D Gevers, L Miropolsky, WS Garrett, ... Genome biology 12, 1-18, 2011 | 11954 | 2011 |
| Structure, function and diversity of the healthy human microbiome HMP Consortium Nature 486 (7402), 207-214, 2012 | 10416* | 2012 |
| Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing NA Bokulich, S Subramanian, JJ Faith, D Gevers, JI Gordon, R Knight, ... Nature methods 10 (1), 57-59, 2013 | 3743 | 2013 |
| Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons BJ Haas, D Gevers, AM Earl, M Feldgarden, DV Ward, G Giannoukos, ... Genome research 21 (3), 494-504, 2011 | 3429 | 2011 |
| The treatment-naive microbiome in new-onset Crohn’s disease D Gevers, S Kugathasan, LA Denson, Y Vázquez-Baeza, W Van Treuren, ... Cell host & microbe 15 (3), 382-392, 2014 | 3225 | 2014 |
| Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment XC Morgan, TL Tickle, H Sokol, D Gevers, KL Devaney, DV Ward, ... Genome biology 13, 1-18, 2012 | 2825 | 2012 |
| A framework for human microbiome research Nature 486 (7402), 215-221, 2012 | 2521* | 2012 |
| Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies PD Schloss, D Gevers, SL Westcott PloS one 6 (12), e27310, 2011 | 2355 | 2011 |
| Genomic analysis identifies association of Fusobacterium with colorectal carcinoma AD Kostic, D Gevers, CS Pedamallu, M Michaud, F Duke, AM Earl, ... Genome research 22 (2), 292-298, 2012 | 2006 | 2012 |
| The microbiome in inflammatory bowel disease: current status and the future ahead AD Kostic, RJ Xavier, D Gevers Gastroenterology 146 (6), 1489-1499, 2014 | 1883 | 2014 |
| Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity A Zhernakova, A Kurilshikov, MJ Bonder, EF Tigchelaar, M Schirmer, ... Science 352 (6285), 565-569, 2016 | 1704 | 2016 |
| Microbial co-occurrence relationships in the human microbiome K Faust, JF Sathirapongsasuti, J Izard, N Segata, D Gevers, J Raes, ... PLoS computational biology 8 (7), e1002606, 2012 | 1497 | 2012 |
| Re-evaluating prokaryotic species D Gevers, FM Cohan, JG Lawrence, BG Spratt, T Coenye, EJ Feil, ... Nature Reviews Microbiology 3 (9), 733-739, 2005 | 1309 | 2005 |
| Potential role of intratumor bacteria in mediating tumor resistance to the chemotherapeutic drug gemcitabine LT Geller, M Barzily-Rokni, T Danino, OH Jonas, N Shental, D Nejman, ... Science 357 (6356), 1156-1160, 2017 | 1296 | 2017 |
| Variation in microbiome LPS immunogenicity contributes to autoimmunity in humans T Vatanen, AD Kostic, E d’Hennezel, H Siljander, EA Franzosa, ... Cell 165 (4), 842-853, 2016 | 1255 | 2016 |
| Disease-specific alterations in the enteric virome in inflammatory bowel disease JM Norman, SA Handley, MT Baldridge, L Droit, CY Liu, BC Keller, ... Cell 160 (3), 447-460, 2015 | 1216 | 2015 |
| The dynamics of the human infant gut microbiome in development and in progression toward type 1 diabetes AD Kostic, D Gevers, H Siljander, T Vatanen, T Hyötyläinen, ... Cell host & microbe 17 (2), 260-273, 2015 | 1186 | 2015 |
| Metabolic reconstruction for metagenomic data and its application to the human microbiome S Abubucker, N Segata, J Goll, AM Schubert, J Izard, BL Cantarel, ... PLoS computational biology 8 (6), e1002358, 2012 | 1158 | 2012 |
| Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples N Segata, SK Haake, P Mannon, KP Lemon, L Waldron, D Gevers, ... Genome biology 13, 1-18, 2012 | 1072 | 2012 |
| Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability M Yassour, T Vatanen, H Siljander, AM Hämäläinen, T Härkönen, ... Science translational medicine 8 (343), 343ra81-343ra81, 2016 | 899 | 2016 |
