| Potential of mean force for protein–protein interaction studies L Jiang, Y Gao, F Mao, Z Liu, L Lai Proteins: Structure, Function, and Bioinformatics 46 (2), 190-196, 2002 | 147 | 2002 |
| Quantitative evaluation of protein–DNA interactions using an optimized knowledge-based potential Z Liu, F Mao, J Guo, B Yan, P Wang, Y Qu, Y Xu Nucleic acids research 33 (2), 546-558, 2005 | 75 | 2005 |
| Structural Mining: Self-Consistent Design on Flexible Protein− Peptide Docking and Transferable Binding Affinity Potential Z Liu, BN Dominy, EI Shakhnovich Journal of the American Chemical Society 126 (27), 8515-8528, 2004 | 66 | 2004 |
| Structure‐based prediction of transcription factor binding sites using a protein‐DNA docking approach Z Liu, JT Guo, T Li, Y Xu Proteins: Structure, Function, and Bioinformatics 72 (4), 1114-1124, 2008 | 50 | 2008 |
| Mapping of orthologous genes in the context of biological pathways: An application of integer programming F Mao, Z Su, V Olman, P Dam, Z Liu, Y Xu Proceedings of the National Academy of Sciences 103 (1), 129-134, 2006 | 49 | 2006 |
| Protein loops on structurally similar scaffolds: database and conformational analysis W Li, Z Liu, L Lai Biopolymers: Original Research on Biomolecules 49 (6), 481-495, 1999 | 48 | 1999 |
| Discovery of a novel, orally efficacious liver X receptor (LXR) β agonist Y Zheng, L Zhuang, KY Fan, CM Tice, W Zhao, C Dong, SD Lotesta, ... Journal of Medicinal Chemistry 59 (7), 3264-3271, 2016 | 30 | 2016 |
| Beyond the rotamer library: Genetic algorithm combined with the disturbing mutation process for upbuilding protein side‐chains Z Liu, L Jiang, Y Gao, S Liang, H Chen, Y Han, L Lai Proteins: Structure, Function, and Bioinformatics 50 (1), 49-62, 2003 | 24 | 2003 |
| Construction of protein binding sites in scaffold structures S Liang, Z Liu, W Li, L Ni, L Lai Biopolymers: Original Research on Biomolecules 54 (7), 515-523, 2000 | 21 | 2000 |
| Protein structure prediction by protein threading Y Xu, Z Liu, L Cai, D Xu Computational Methods for Protein Structure Prediction and Modeling, 1-42, 2007 | 19 | 2007 |
| Structure-based design technology contour and its application to the design of renin inhibitors A Ishchenko, Z Liu, P Lindblom, G Wu, KC Jim, RD Gregg, DA Claremon, ... Journal of chemical information and modeling 52 (8), 2089-2097, 2012 | 18 | 2012 |
| Dihydropyrrolopyridine inhibitors of ROR-gamma DA Claremon, LW Dillard, C Dong, Y Fan, L Jia, Z Liu, SD Lotesta, ... US Patent 10,047,085, 2018 | 13 | 2018 |
| A point-process model for rapid identification of post-translational modifications B Yan, T Zhou, P Wang, Z Liu, VA EMANUELE II, V Olman, Y Xu Biocomputing 2006, 327-338, 2006 | 13 | 2006 |
| Calculation of protein surface loops using Monte-Carlo simulated annealing simulation Z Liu, F Mao, W Li, Y Han, L Lai Molecular modeling annual 6 (1), 1-8, 2000 | 13 | 2000 |
| Discovery of Potent Inhibitors of 11β-Hydroxysteroid Dehydrogenase Type 1 Using a Novel Growth-Based Protocol of in Silico Screening and Optimization in … Z Liu, SB Singh, Y Zheng, P Lindblom, C Tice, C Dong, L Zhuang, Y Zhao, ... Journal of chemical information and modeling 59 (8), 3422-3436, 2019 | 8 | 2019 |
| Two distinct calmodulin binding sites in the third intracellular loop and carboxyl tail of angiotensin II (AT 1A) receptor R Zhang, Z Liu, Y Qu, Y Xu, Q Yang PloS one 8 (6), e65266, 2013 | 8 | 2013 |
| Modeling the third loop of short‐chain snake venom neurotoxins: Roles of the short‐range and long‐range interactions Z Liu, W Li, H Zhang, Y Han, L Lai Proteins: Structure, Function, and Bioinformatics 42 (1), 6-16, 2001 | 7 | 2001 |
| Hit-to-lead optimization and discovery of a potent, and orally bioavailable G protein coupled receptor kinase 2 (GRK2) inhibitor G Xu, MD Gaul, Z Liu, RL DesJarlais, J Qi, W Wang, D Krosky, I Petrounia, ... Bioorganic & Medicinal Chemistry Letters 30 (23), 127602, 2020 | 4 | 2020 |
| An electronic environment and contact direction sensitive scoring function for predicting affinities of protein–ligand complexes in Contour® PR Lindblom, G Wu, Z Liu, KC Jim, JJ Baldwin, RE Gregg, DA Claremon, ... Journal of Molecular Graphics and Modelling 53, 118-127, 2014 | 4 | 2014 |
| Structure-based design technology CONTOUR and its application to drug discovery Z Liu, P Lindblom, DA Claremon, SB Singh Innovations in Biomolecular Modeling and Simulations 2, 265-280, 2012 | 3 | 2012 |
